RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 METTL23Q86XA0 190 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 RNF135Q8IUD6 432 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 EFCAB13Q8IY85 973 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 CSGALNACT2Q8N6G5 542 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 XXYLT1Q8NBI6 393 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 ACSF2Q96CM8 615 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 ANKRD36BP1Q96IX9 119 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 SENP8Q96LD8 212 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 PRKD2Q9BZL6 878 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 HOOK1Q9UJC3 728 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 FBXL5Q9UKA1 691 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 FBXW11Q9UKB1 542 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 ANO9A1A5B4 782 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 PRRG1O14668 218 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 PPEF2O14830 753 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 TNNC2P02585 160 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 KRT19P08727 400 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 PRR29P0C7W0 189 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 CPB1P15086 417 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 MRPL58Q14197 206 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 BMT2Q1RMZ1 405 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 UVSSAQ2YD98 709 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 SV2CQ496J9 727 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 RSPO2Q6UXX9 243 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 CBWD2Q8IUF1 395 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 ZNF461Q8TAF7 563 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 ZNF560Q96MR9 790 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 FNBP1Q96RU3 617 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 OXCT2Q9BYC2 517 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 AGAP1Q9UPQ3 857 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 ANK1P16157 1881 aa19.53■□□□□ 0.72
PDLIM2-215ENST00000456545 CYB561D2O14569 222 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 DCXO43602 365 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 EXOC3O60645 756 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 XYLBO75191 536 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 ITGB3P05106 788 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 HNRNPA1P09651 372 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 PNPLA4P41247 253 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 ROR1Q01973 937 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 DPYDQ12882 1025 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 SNRNP35Q16560 246 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 OVOS1Q6IE37 1185 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 SLC8B1Q6J4K2 584 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 OTOP3Q7RTS5 596 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 PLCD3Q8N3E9 789 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 TDRD5Q8NAT2 981 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 SLC7A14Q8TBB6 771 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 C1QTNF1Q9BXJ1 281 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 EPHX3Q9H6B9 360 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 CHMP5Q9NZZ3 219 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 DSEQ9UL01 958 aa19.52■□□□□ 0.72
PDLIM2-215ENST00000456545 PI4K2BG5E9Z4 385 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 CCL16O15467 120 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 TNNI1P19237 187 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 TYMPP19971 482 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 POLR2BP30876 1174 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 AARSP49588 968 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 RBP5P82980 135 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 FAM160A1Q05DH4 1040 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 DUOXA2Q1HG44 320 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 TPGS2Q68CL5 300 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 RTL10Q7L3V2 364 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 THEM5Q8N1Q8 247 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 KIAA0895Q8NCT3 520 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 CYP4F11Q9HBI6 524 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 ITGA11Q9UKX5 1188 aa19.51■□□□□ 0.71
PDLIM2-215ENST00000456545 OR6C75A6NL08 312 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 KPNA7A9QM74 516 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 C2CD4DB7Z1M9 353 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 SPTLC1O15269 473 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 CALUO43852 315 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 TBC1D4O60343 1298 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 RHOBTB3O94955 611 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 OAZ2O95190 189 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 LRG1P02750 347 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 DLATP10515 647 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 GBP2P32456 591 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 WNT7BP56706 349 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 BFSP1Q12934 665 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 LMBRD2Q68DH5 695 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 FMR1NBQ8N0W7 255 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 KHSRPQ92945 711 aaKnown RBP eCLIP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 CCDC127Q96BQ5 260 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 RHOBTB2Q9BYZ6 727 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 WDR6Q9NNW5 1121 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 INTS13Q9NVM9 706 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 RMND1Q9NWS8 449 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 MUTYHQ9UIF7 546 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 USTQ9Y2C2 406 aa19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 SPTBN5Q9NRC6 3674 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-215ENST00000456545 WDR27A2RRH5 827 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 PDXKO00764 312 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 ABLIM3O94929 683 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 SMC2O95347 1197 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 ATF2P15336 505 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 MYO1EQ12965 1108 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 PNOCQ13519 176 aa19.49■□□□□ 0.71
PDLIM2-215ENST00000456545 KCNB1Q14721 858 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms