RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ELF1P32519 619 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 ARPP19P56211 112 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 LMNB2Q03252 620 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 DMWDQ09019 674 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
LMCD1-206ENST00000456506 ZNF280DQ6N043 979 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 MFSD6LQ8IWD5 586 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 ZSCAN18Q8TBC5 510 aaPredicted RBP13□□□□□ -0.33
LMCD1-206ENST00000456506 SNX29Q8TEQ0 813 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 DEPDC1BQ8WUY9 529 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 FAM3CQ92520 227 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 KCNN1Q92952 543 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 LLPHQ9BRT6 129 aaKnown RBP13□□□□□ -0.33
LMCD1-206ENST00000456506 C17orf75Q9HAS0 396 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 LMAN1LQ9HAT1 526 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 PCDHB6Q9Y5E3 794 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 PIAS3Q9Y6X2 628 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 NUP205Q92621 2012 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 USP24Q9UPU5 2620 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 ACACBO00763 2458 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 TTC26A0AVF1 554 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 K7ESF4 209 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 SLC16A4O15374 487 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 TOM1L1O75674 476 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 PAPSS2O95340 614 aaPredicted RBP12.99□□□□□ -0.33
LMCD1-206ENST00000456506 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
LMCD1-206ENST00000456506 CDC25AP30304 524 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 LRPAP1P30533 357 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 HOXC13P31276 330 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 SATB1Q01826 763 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 FCHO2Q0JRZ9 810 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 PTGDRQ13258 359 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 TEAD2Q15562 447 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 HYIQ5T013 277 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 LEMD2Q8NC56 503 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 TMEM161BQ8NDZ6 487 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 SPIRE2Q8WWL2 714 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 C2orf42Q9NWW7 574 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
LMCD1-206ENST00000456506 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 NUB1Q9Y5A7 615 aa12.99□□□□□ -0.33
LMCD1-206ENST00000456506 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
LMCD1-206ENST00000456506 SFI1A8K8P3 1242 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 HEPACAM2A8MVW5 462 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 HRO43593 1189 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 KRT37O76014 449 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 OR4Q2P0C623 313 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 CXCL8P10145 99 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 MYL4P12829 197 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 SDHBP21912 280 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 MCM4P33991 863 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 CCR3P51677 355 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 MCL1Q07820 350 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 SPEM2Q0P670 501 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
LMCD1-206ENST00000456506 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
LMCD1-206ENST00000456506 STXBP5Q5T5C0 1151 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 CYP4A22Q5TCH4 519 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 LAIR1Q6GTX8 287 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 TXNDC11Q6PKC3 985 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 ZNF512Q96ME7 567 aaPredicted RBP12.98□□□□□ -0.33
LMCD1-206ENST00000456506 PNMA5Q96PV4 448 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 RTKNQ9BST9 563 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 DNM3Q9UQ16 869 aa12.98□□□□□ -0.33
LMCD1-206ENST00000456506 CHD8Q9HCK8 2581 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 DCDC2BA2VCK2 349 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 ADRB2P07550 413 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 CCNE1P24864 410 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 PRPHP41219 470 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 SOX9P48436 509 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 NRLP54845 237 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 YWHAHQ04917 246 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-206ENST00000456506 SPAG1Q07617 926 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 LPAL2Q16609 132 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 Q6ZS52 159 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 CELF5Q8N6W0 485 aaKnown RBP12.97□□□□□ -0.33
LMCD1-206ENST00000456506 APPL2Q8NEU8 664 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 KIF2CQ99661 725 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 GPR88Q9GZN0 384 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.97□□□□□ -0.33
LMCD1-206ENST00000456506 PPP4R2Q9NY27 417 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 ANKFY1Q9P2R3 1169 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 CDV3Q9UKY7 258 aaKnown RBP12.97□□□□□ -0.33
LMCD1-206ENST00000456506 TIMM13Q9Y5L4 95 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-206ENST00000456506 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
LMCD1-206ENST00000456506 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
LMCD1-206ENST00000456506 WDFY3Q8IZQ1 3526 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 A0A1W2PRU2 124 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 PPEF2O14830 753 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms