RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 KANSL1LA0AUZ9 987 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PRR5-ARHGAP8B1AHC4 643 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZC3H11AO75152 810 aaKnown RBP eCLIP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF189O75820 626 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PDE5AO76074 875 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SLITRK3O94933 977 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 OR52Z1P0C646 297 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CYP2C9P11712 490 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 KRT10P13645 584 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ARFIP2P53365 341 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 VCPP55072 806 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CDH15P55291 814 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ACTR3P61158 418 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ARHGAP8P85298 464 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DRAP1Q14919 205 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SLMAPQ14BN4 828 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 HERC4Q5GLZ8 1057 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SYDE2Q5VT97 1194 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DENND2CQ68D51 928 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 LMBRD2Q68DH5 695 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 RINT1Q6NUQ1 792 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 RIPOR1Q6ZS17 1223 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 HIPK4Q8NE63 616 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CCHCR1Q8TD31 782 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 NAT14Q8WUY8 206 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ARHGEF1Q92888 912 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 RANBP9Q96S59 729 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 C17orf75Q9HAS0 396 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SPO11Q9Y5K1 396 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PTPRFP10586 1907 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 LAMB2P55268 1798 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 A0A0B4J269 797 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 C7orf72A4D263 438 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 DLGAP1O14490 977 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PIM1P11309 404 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PAX3P23760 479 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CYP3A7P24462 503 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 RFC1P35251 1148 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 EPS15P42566 896 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 ITGA8P53708 1063 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CTSWP56202 376 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC34A1Q06495 639 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TUBB3Q13509 450 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 MESDQ14696 234 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PDK4Q16654 411 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CYP1B1Q16678 543 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 LRRC23Q53EV4 343 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CMPK2Q5EBM0 449 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 ANKRD22Q5VYY1 191 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CYB5RLQ6IPT4 315 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 EPM2AIP1Q7L775 607 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 MAVSQ7Z434 540 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SCYL3Q8IZE3 742 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM130Q8N3G9 435 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TAB3Q8N5C8 712 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CELF1Q92879 486 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC124Q96CT7 223 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CNOT10Q9H9A5 744 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CNOT7Q9UIV1 285 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 GOLGA6L10A6NI86 522 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CD48P09326 243 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 DLATP10515 647 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 NMT1P30419 496 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 HOXD12P35452 270 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PPP1R2P41236 205 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TRAPPC10P48553 1259 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SNAPC2Q13487 334 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CAMK2BQ13554 666 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 ACVR2BQ13705 512 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 GPR162Q16538 588 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 IFI16Q16666 785 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF423Q2M1K9 1284 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 RAB6CQ53S08 254 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 C6orf183Q5T699 404 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PPP1R2P3Q6NXS1 205 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PGM2L1Q6PCE3 622 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 BTNL9Q6UXG8 535 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 HEATR3Q7Z4Q2 680 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 NOP9Q86U38 636 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC13A5Q86YT5 568 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TICAM1Q8IUC6 712 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SMYD1Q8NB12 490 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SEMA4DQ92854 862 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 GCNAQ96QF7 691 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 PAIP2Q9BPZ3 127 aaKnown RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 EDEM3Q9BZQ6 932 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 RAB6CQ9H0N0 254 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TRPM3Q9HCF6 1732 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 NUP98P52948 1817 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 EMSYQ7Z589 1322 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM150BA6NC51 233 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 C2CD2LO14523 706 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 FTLP02792 175 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 SSTR3P32745 418 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 COILP38432 576 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 DPP6P42658 865 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 CD151P48509 253 aa4.81□□□□□ -1.64
DEPDC1-202ENST00000456315 KBTBD12Q3ZCT8 623 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms