RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 MDM1Q8TC05 714 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 TRIM11Q96F44 468 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CNOT6LQ96LI5 555 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 NACC1Q96RE7 527 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 TSG101Q99816 390 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 SIKE1Q9BRV8 207 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 RUSC1Q9BVN2 902 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 FGFBP2Q9BYJ0 223 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ADAM7Q9H2U9 754 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 DCLRE1BQ9H816 532 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 TXLNGQ9NUQ3 528 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 FAIMQ9NVQ4 179 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 SMARCAL1Q9NZC9 954 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ZNF180Q9UJW8 692 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 USP20Q9Y2K6 914 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 TTLL3Q9Y4R7 772 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 hCG_2014768A0A024R1R8 64 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 AKR1B10O60218 316 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 TPPPO94811 219 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 NR3C2P08235 984 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 CCND2P30279 289 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 TCF7P36402 384 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-218ENST00000456174 RTP1P59025 263 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 ARPC4P59998 168 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
HDAC9-218ENST00000456174 ITGA7Q13683 1181 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 ITGA9Q13797 1035 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 TCERG1LQ5VWI1 586 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 RINT1Q6NUQ1 792 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 XRRA1Q6P2D8 792 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 SLC2A7Q6PXP3 512 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 SPATA24Q86W54 205 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 MAP7D3Q8IWC1 876 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 FAM13CQ8NE31 585 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 NSUN6Q8TEA1 469 aaKnown RBP8.1□□□□□ -1.11
HDAC9-218ENST00000456174 LXNQ9BS40 222 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 TUBGCP2Q9BSJ2 902 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 PFDN4Q9NQP4 134 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 TBC1D22BQ9NU19 505 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 PTTG2Q9NZH5 202 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 WRAP73Q9P2S5 460 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-218ENST00000456174 PRKAG3Q9UGI9 489 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 PNMA3Q9UL41 463 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 ARL2BPQ9Y2Y0 163 aa8.1□□□□□ -1.11
HDAC9-218ENST00000456174 A0A0G2JLL6 359 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 MACROD2A1Z1Q3 448 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 LGALS16A8MUM7 142 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 TIMM44O43615 452 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 FGFR1OPO95684 399 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 LYNP07948 512 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 MTIF2P46199 727 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 CLCN2P51788 898 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 EMP3P54852 163 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 TSR1Q2NL82 804 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 PDCD4Q53EL6 469 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 GRAMD4Q6IC98 578 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 FOXR2Q6PJQ5 311 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 MARK2Q7KZI7 788 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 PRRT2Q7Z6L0 340 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 VSIG10LQ86VR7 867 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 SFR1Q86XK3 245 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 PEX5LQ8IYB4 626 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 MB21D1Q8N884 522 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 PDCD7Q8N8D1 485 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 INPP5DQ92835 1189 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 EHD2Q9NZN4 543 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 TRIM33Q9UPN9 1127 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 ITM2BQ9Y287 266 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 DUSP10Q9Y6W6 482 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 SRCAPQ6ZRS2 3230 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 SMIM31A0A1B0GVY4 71 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 IQCA1LA6NCM1 817 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 RSPH10B2B2RC85 870 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 CXCL11O14625 94 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 GRIN3BO60391 1043 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 TBCAO75347 108 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 AFPP02771 609 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 RSPH10BP0C881 870 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 PIM1P11309 404 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 HALP42357 657 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 DNM2P50570 870 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 NSUN2Q08J23 767 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 RCN1Q15293 331 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 KRT71Q3SY84 523 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 ZCWPW2Q504Y3 356 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 ZC2HC1CQ53FD0 456 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 LBX2Q6XYB7 198 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 C1orf186Q6ZWK4 172 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 DAAM2Q86T65 1068 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 NELFCDQ8IXH7 590 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 SLC17A8Q8NDX2 589 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms