RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 UBLCP1Q8WVY7 318 aaPredicted RBP14.55□□□□□ -0.08
CLK3-203ENST00000454830 IFT122Q9HBG6 1241 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 TNFSF13BQ9Y275 285 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLK3-203ENST00000454830 HOXC6P09630 235 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 TSEN2Q8NCE0 465 aaKnown RBP14.55□□□□□ -0.08
CLK3-203ENST00000454830 C16orf70Q9BSU1 422 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 ERVK-5Q9HDB9 667 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 KLHL11Q9NVR0 708 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 AGAP1Q9UPQ3 857 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 LOC285556D6RIA3 1793 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 CCDC66A2RUB6 948 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
CLK3-203ENST00000454830 FAM71BQ8TC56 605 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 OSMRQ99650 979 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 FAM204AQ9H8W3 233 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 SNX24Q9Y343 169 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 ATP8B3O60423 1300 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 POLR2BP30876 1174 aaKnown RBP14.54□□□□□ -0.08
CLK3-203ENST00000454830 KCNJ1P48048 391 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 BEX3Q00994 111 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 GRB14Q14449 540 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 CYP4A22Q5TCH4 519 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 C18orf8Q96DM3 657 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 ACAP3Q96P50 834 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 RPS6KC1Q96S38 1066 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 MRPL47Q9HD33 250 aaKnown RBP14.54□□□□□ -0.08
CLK3-203ENST00000454830 RASAL2Q9UJF2 1139 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 ADAM21Q9UKJ8 722 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 LOC102724159A0A0B4J2E5 919 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 UNGP13051 313 aaPredicted RBP14.54□□□□□ -0.08
CLK3-203ENST00000454830 PWP2Q15269 919 aaKnown RBP14.54□□□□□ -0.08
CLK3-203ENST00000454830 PPP1R7Q15435 360 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 CCL14Q16627 93 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 DNAJC24Q6P3W2 148 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 TRIM72Q6ZMU5 477 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 TMEM35BQ8NCS4 154 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.54□□□□□ -0.08
CLK3-203ENST00000454830 C1orf54Q8WWF1 131 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 KIF12Q96FN5 646 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 MED4Q9NPJ6 270 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 GDF3Q9NR23 364 aa14.54□□□□□ -0.08
CLK3-203ENST00000454830 CYP2C9P11712 490 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 NOMO3P69849 1222 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 KCTD16Q68DU8 428 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 SESTD1Q86VW0 696 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 ERICH1Q86X53 443 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 CCDC114Q96M63 670 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 SLITRK6Q9H5Y7 841 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 BCCIPQ9P287 314 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLK3-203ENST00000454830 TNPO2O14787 897 aaKnown RBP14.53□□□□□ -0.08
CLK3-203ENST00000454830 NPTXRO95502 500 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 VPS41P49754 854 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 PLTPP55058 493 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 YWHAEP62258 255 aaKnown RBP14.53□□□□□ -0.08
CLK3-203ENST00000454830 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 GLRA4Q5JXX5 417 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 KAZNQ674X7 775 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 IQSEC1Q6DN90 963 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLK3-203ENST00000454830 TLK2Q86UE8 772 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 FAM118BQ9BPY3 351 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 RAB17Q9H0T7 212 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 SLC45A1Q9Y2W3 748 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 HES2Q9Y543 173 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 TCRBV7S2A1N4TA0A589 114 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 IL18RAPO95256 599 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 ENPEPQ07075 957 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 CST9Q5W186 159 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 PDZD7Q9H5P4 517 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 VIPAS39Q9H9C1 493 aa14.53□□□□□ -0.08
CLK3-203ENST00000454830 SLC15A5A6NIM6 579 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 IGF2BP3O00425 579 aaKnown RBP eCLIP14.52□□□□□ -0.08
CLK3-203ENST00000454830 PIK3R2O00459 728 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 MYBL1P10243 752 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 SGO2Q562F6 1265 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 CCDC137Q6PK04 289 aaKnown RBP14.52□□□□□ -0.08
CLK3-203ENST00000454830 MAMDC4Q6UXC1 1216 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 RNF25Q96BH1 459 aaPredicted RBP14.52□□□□□ -0.08
CLK3-203ENST00000454830 HEXIM2Q96MH2 286 aaKnown RBP14.52□□□□□ -0.08
CLK3-203ENST00000454830 TMEM59LQ9UK28 342 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 DOCK3Q8IZD9 2030 aa14.52□□□□□ -0.08
CLK3-203ENST00000454830 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 OPA1O60313 960 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 CDR1P51861 262 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 CENPCQ03188 943 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 CCDC25Q86WR0 208 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 MCEEQ96PE7 176 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 GCOM2Q9BZD3 368 aaPredicted RBP14.52□□□□□ -0.09
CLK3-203ENST00000454830 SMYD3Q9H7B4 428 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 A0A0G2JMZ2 1700 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 GOLGA6L10A6NI86 522 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 PI4K2BG5E9Z4 385 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 ADCY6O43306 1168 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 FAM189A1O60320 539 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 ATF7P17544 494 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms