RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 JAM2P57087 298 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 WDR5P61964 334 aaKnown RBP11.81□□□□□ -0.52
SCN9A-205ENST00000454569 HSP90AA2PQ14568 343 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-205ENST00000454569 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 PDXDC1Q6P996 788 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 WDR59Q6PJI9 974 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 PPFIBP1Q86W92 1011 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 TMEM139Q8IV31 216 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 ELAC1Q9H777 363 aaKnown RBP11.81□□□□□ -0.52
SCN9A-205ENST00000454569 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 NPDC1Q9NQX5 325 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-205ENST00000454569 CEP72Q9P209 647 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 DNAJB4Q9UDY4 337 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 PCDHB7Q9Y5E2 793 aa11.81□□□□□ -0.52
SCN9A-205ENST00000454569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.524e-6■■■□□ 17.6
SCN9A-205ENST00000454569 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
SCN9A-205ENST00000454569 ITGB1P05556 798 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 LRPAP1P30533 357 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 RAP1GAPP47736 663 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 CDH8P55286 799 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
SCN9A-205ENST00000454569 FPGSQ05932 587 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 TRPC3Q13507 836 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 RAPGEF1Q13905 1077 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 DRAP1Q14919 205 aaPredicted RBP11.8□□□□□ -0.52
SCN9A-205ENST00000454569 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 PPM1KQ8N3J5 372 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 HPDLQ96IR7 371 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 RPS6KC1Q96S38 1066 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 CHP1Q99653 195 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 ITGA11Q9UKX5 1188 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 NME7Q9Y5B8 376 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 MYH10P35580 1976 aa11.8□□□□□ -0.52
SCN9A-205ENST00000454569 A0A1W2PQJ5 194 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 HCRTO43612 131 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 PLEKP08567 350 aaPredicted RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 SKILP12757 684 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 PBX3P40426 434 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 ASPAP45381 313 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 RBP5P82980 135 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 ZBED6P86452 979 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 CETN1Q12798 172 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 SGSM1Q2NKQ1 1148 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 ZNF699Q32M78 642 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 WDR72Q3MJ13 1102 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 PAN2Q504Q3 1202 aaKnown RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 NOMO2Q5JPE7 1267 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 LRRC8AQ8IWT6 810 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 HACE1Q8IYU2 909 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 RPUSD2Q8IZ73 545 aaKnown RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 UBR7Q8N806 425 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 HASPINQ8TF76 798 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 TOP1MTQ969P6 601 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 EPAS1Q99814 870 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 HTATIP2Q9BUP3 242 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 NUP58Q9BVL2 599 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 SMYD3Q9H7B4 428 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 NRDE2Q9H7Z3 1164 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 ABHD10Q9NUJ1 306 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 NXF1Q9UBU9 619 aaKnown RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 PRKAG2Q9UGJ0 569 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 NLRC5Q86WI3 1866 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 TBKBP1A7MCY6 615 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 I3L4J1 428 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 DGKIO75912 1065 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 FGBP02675 491 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 CYP3A5P20815 502 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 CCZ1BP86790 482 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 CCZ1P86791 482 aaPredicted RBP11.79□□□□□ -0.52
SCN9A-205ENST00000454569 DSC1Q08554 894 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 GRIK3Q13003 919 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 MTF1Q14872 753 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 UPP1Q16831 310 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 GLB1LQ6UWU2 654 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 CACNA2D4Q7Z3S7 1137 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 NPAS4Q8IUM7 802 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 COLGALT2Q8IYK4 626 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 OLIG1Q8TAK6 271 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 DNAJC7Q99615 494 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 STK33Q9BYT3 514 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 UBN1Q9NPG3 1134 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 FBXL5Q9UKA1 691 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 LRFN2Q9ULH4 789 aa11.79□□□□□ -0.52
SCN9A-205ENST00000454569 FAM170AA1A519 330 aa11.78□□□□□ -0.52
SCN9A-205ENST00000454569 F8VZ95 297 aa11.78□□□□□ -0.52
SCN9A-205ENST00000454569 PODXLO00592 558 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms