RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 M0QZQ0 153 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 SEC24AO95486 1093 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 CPB1P15086 417 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 PSMC3P17980 439 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 CYP3A5P20815 502 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 CD72P21854 359 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 CDC25AP30304 524 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 LRPAP1P30533 357 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 CCR2P41597 374 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
USP1-204ENST00000452143 CSTF1Q05048 431 aaKnown RBP11.87□□□□□ -0.51
USP1-204ENST00000452143 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 PLD1Q13393 1074 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 PUM1Q14671 1186 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP1-204ENST00000452143 FAM78AQ5JUQ0 283 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 GPR161Q8N6U8 529 aaKnown RBP11.87□□□□□ -0.51
USP1-204ENST00000452143 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
USP1-204ENST00000452143 BEST2Q8NFU1 509 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 ATRIPQ8WXE1 791 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 SMARCD2Q92925 531 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 TCEAL4Q96EI5 215 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 ZNF512Q96ME7 567 aaPredicted RBP11.87□□□□□ -0.51
USP1-204ENST00000452143 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 KIF2CQ99661 725 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 TRMT61BQ9BVS5 477 aaKnown RBP11.87□□□□□ -0.51
USP1-204ENST00000452143 PLA2G2FQ9BZM2 168 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 EPC1Q9H2F5 836 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 TRPV4Q9HBA0 871 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 ZSCAN32Q9NX65 697 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 TUBGCP4Q9UGJ1 667 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 ANK1P16157 1881 aa11.87□□□□□ -0.51
USP1-204ENST00000452143 TTC26A0AVF1 554 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 SHISA7A6NL88 538 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 SLC26A4O43511 780 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 XPOTO43592 962 aaKnown RBP11.86□□□□□ -0.51
USP1-204ENST00000452143 LILRB5O75023 590 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 OAZ2O95190 189 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 CLTAP09496 248 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 CXCL8P10145 99 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
USP1-204ENST00000452143 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP1-204ENST00000452143 SLC12A3P55017 1021 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 NCKAP1LP55160 1127 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 PPP2R3AQ06190 1150 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 TWF1Q12792 350 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 GRM2Q14416 872 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 PPP2R5DQ14738 602 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 ARL6IP4Q66PJ3 421 aaKnown RBP11.86□□□□□ -0.51
USP1-204ENST00000452143 C1orf228Q6PIY5 440 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 SECISBP2LQ93073 1101 aaKnown RBP11.86□□□□□ -0.51
USP1-204ENST00000452143 E2F7Q96AV8 911 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 MSANTD3Q96H12 275 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 CDK5RAP3Q96JB5 506 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 ZBTB45Q96K62 511 aaPredicted RBP11.86□□□□□ -0.51
USP1-204ENST00000452143 AK8Q96MA6 479 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 GPR88Q9GZN0 384 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 CHRDQ9H2X0 955 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 DLL3Q9NYJ7 618 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 CEP72Q9P209 647 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 NCDNQ9UBB6 729 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 UBQLN1Q9UMX0 589 aaKnown RBP11.86□□□□□ -0.51
USP1-204ENST00000452143 YIPF1Q9Y548 306 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 SPTBN2O15020 2390 aa11.86□□□□□ -0.51
USP1-204ENST00000452143 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 HNRNPDLO14979 420 aaKnown RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 PLA2G4BP0C869 781 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 SDHBP21912 280 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 PAX3P23760 479 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 ABCD1P33897 745 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 MATR3P43243 847 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP1-204ENST00000452143 MLLT6P55198 1093 aaPredicted RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 RAD51AP2Q09MP3 1159 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 FZD5Q13467 585 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 ZRSR1Q15695 479 aaKnown RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 ZBTB6Q15916 424 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 TMEM119Q4V9L6 283 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 VITQ6UXI7 678 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 ZNF687Q8N1G0 1237 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 ZSCAN18Q8TBC5 510 aaPredicted RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 BICD1Q96G01 975 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 PNMA5Q96PV4 448 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 ZNF334Q9HCZ1 680 aaPredicted RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 SMG5Q9UPR3 1016 aaKnown RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 PIAS3Q9Y6X2 628 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 TCHHQ07283 1943 aa11.85□□□□□ -0.51
USP1-204ENST00000452143 KIF26AQ9ULI4 1882 aaPredicted RBP11.85□□□□□ -0.51
USP1-204ENST00000452143 ACACBO00763 2458 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 TPRP12270 2363 aaKnown RBP11.84□□□□□ -0.51
USP1-204ENST00000452143 VWA3AA6NCI4 1184 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 OR6C75A6NL08 312 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 FAM189A1O60320 539 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 MOSPD3O75425 235 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 PIGRP01833 764 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 MYL4P12829 197 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 TYMPP19971 482 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 GDI1P31150 447 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms