RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 CAVIN2O95810 425 aa25.9■■□□□ 1.74
CPSF4-207ENST00000451876 EEF1GP26641 437 aaKnown RBP25.9■■□□□ 1.74
CPSF4-207ENST00000451876 ERVFC1P60507 584 aa25.9■■□□□ 1.74
CPSF4-207ENST00000451876 UBE3AQ05086 875 aa25.9■■□□□ 1.74
CPSF4-207ENST00000451876 FAM171A1Q5VUB5 890 aa25.9■■□□□ 1.74
CPSF4-207ENST00000451876 FAM200AQ8TCP9 573 aa25.9■■□□□ 1.74
CPSF4-207ENST00000451876 XYLT2Q9H1B5 865 aa25.9■■□□□ 1.74
CPSF4-207ENST00000451876 HLA-DRAP01903 254 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 SOD2P04179 222 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 ATP1A3P13637 1013 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 IRS1P35568 1242 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 PNPLA4P41247 253 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 PIK3CAP42336 1068 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 TRPC3Q13507 836 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 HPDLQ96IR7 371 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 SUSD3Q96L08 255 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 TUBGCP2Q9BSJ2 902 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 ZBP1Q9H171 429 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 TLR9Q9NR96 1032 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 PCDHGC5Q9Y5F6 944 aa25.89■■□□□ 1.74
CPSF4-207ENST00000451876 SMTNL1A8MU46 457 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 BECN2A8MW95 431 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 KPNA7A9QM74 516 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 AFPP02771 609 aaKnown RBP25.88■■□□□ 1.73
CPSF4-207ENST00000451876 SV2CQ496J9 727 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 MIIPQ5JXC2 388 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 RTP2Q5QGT7 225 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 SEMA4DQ92854 862 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 PI4K2AQ9BTU6 479 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 HERC2P3Q9BVR0 1158 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 PUF60Q9UHX1 559 aaKnown RBP25.88■■□□□ 1.73
CPSF4-207ENST00000451876 R3HCC1Q9Y3T6 440 aaKnown RBP25.88■■□□□ 1.73
CPSF4-207ENST00000451876 M0QZQ0 153 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 TKTP29401 623 aaKnown RBP25.88■■□□□ 1.73
CPSF4-207ENST00000451876 MYL7Q01449 175 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 KRT31Q15323 416 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 MAN2A1Q16706 1144 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 AUTS2Q8WXX7 1259 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 SENP8Q96LD8 212 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 TCF25Q9BQ70 676 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.88■■□□□ 1.733e-7■■■■■ 76.5
CPSF4-207ENST00000451876 CHST7Q9NS84 486 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 TAB2Q9NYJ8 693 aa25.88■■□□□ 1.73
CPSF4-207ENST00000451876 TRAPPC3O43617 180 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 PRKCSHP14314 528 aaPredicted RBP25.87■■□□□ 1.73
CPSF4-207ENST00000451876 ELAVL2Q12926 359 aaKnown RBP25.87■■□□□ 1.73
CPSF4-207ENST00000451876 MYO1EQ12965 1108 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 DSTYKQ6XUX3 929 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 CEP57Q86XR8 500 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 DEFB123Q8N688 67 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 FBXL13Q8NEE6 735 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 COQ4Q9Y3A0 265 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 SNX9Q9Y5X1 595 aa25.87■■□□□ 1.73
CPSF4-207ENST00000451876 CTSAP10619 480 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 FGFR3P22607 806 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 ADGRE1Q14246 886 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 ZNF699Q32M78 642 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 USP41Q3LFD5 358 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 SPOPLQ6IQ16 392 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 TMC7Q7Z402 723 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 RAB20Q9NX57 234 aa25.86■■□□□ 1.73
CPSF4-207ENST00000451876 TIMM13Q9Y5L4 95 aaPredicted RBP25.86■■□□□ 1.73
CPSF4-207ENST00000451876 C2CD2LO14523 706 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 STAU1O95793 577 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 ASS1P00966 412 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 GLUD2P49448 558 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 WDR72Q3MJ13 1102 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 RNF214Q8ND24 703 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 LMAN2LQ9H0V9 348 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 ENTPD7Q9NQZ7 604 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 PRRC2BQ5JSZ5 2229 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 FSCN2O14926 492 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 ATICP31939 592 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 DSG1Q02413 1049 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 PTPN14Q15678 1187 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 VWA3BQ502W6 1294 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 PLPP4Q5VZY2 271 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 APTXQ7Z2E3 356 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 MRPL38Q96DV4 380 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 GUCD1Q96NT3 240 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 TTPALQ9BTX7 342 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 NDST4Q9H3R1 872 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 VRTNQ9H8Y1 702 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 APOBEC3GQ9HC16 384 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 GDAP2Q9NXN4 497 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 STK39Q9UEW8 545 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 LIMA1Q9UHB6 759 aaKnown RBP25.85■■□□□ 1.73
CPSF4-207ENST00000451876 PCDHB8Q9UN66 801 aa25.85■■□□□ 1.73
CPSF4-207ENST00000451876 CYB561D2O14569 222 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 SYN3O14994 580 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 PMM2O15305 246 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 N4BP1O75113 896 aaKnown RBP25.84■■□□□ 1.73
CPSF4-207ENST00000451876 CLSTN1O94985 981 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 URODP06132 367 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 CDK11BP21127 795 aaKnown RBP25.84■■□□□ 1.73
CPSF4-207ENST00000451876 SGSM1Q2NKQ1 1148 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 KIAA0319Q5VV43 1072 aa25.84■■□□□ 1.73
CPSF4-207ENST00000451876 PRSS55Q6UWB4 352 aaPredicted RBP25.84■■□□□ 1.73
CPSF4-207ENST00000451876 VPS16Q9H269 839 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms