RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 TXNRD3NBQ6F5E7 133 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ZDHHC24Q6UX98 284 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 PIWIL1Q96J94 861 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 PHF12Q96QT6 1004 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 C11orf84Q9BUA3 381 aaPredicted RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 ELOVL4Q9GZR5 314 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 TRPC6Q9Y210 931 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 HCRTO43612 131 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 MMP8P22894 467 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 IVDP26440 423 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 GUCY2FP51841 1108 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 SOX4Q06945 474 aaPredicted RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 MAMLD1Q13495 774 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TAZQ16635 292 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 MAP3K21Q5TCX8 1036 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 HHIPL1Q96JK4 782 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 SNX27Q96L92 541 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 IFT74Q96LB3 600 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 SPAG5Q96R06 1193 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 NOC2LQ9Y3T9 749 aaKnown RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 ALG6Q9Y672 507 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 SPTLC1O15269 473 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 RHOXF2BP0C7M4 288 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 PYGMP11217 842 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TCP1P17987 556 aaKnown RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 SSTR3P32745 418 aaPredicted RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 SLC7A5Q01650 507 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 NCOA4Q13772 614 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 BNIPLQ7Z465 357 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 ZBTB33Q86T24 672 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 PPM1KQ8N3J5 372 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 PRELID2Q8N945 189 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 KBTBD7Q8WVZ9 684 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 RHOXF2Q9BQY4 288 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 KDM4CQ9H3R0 1056 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 AVENQ9NQS1 362 aaPredicted RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 SETD4Q9NVD3 440 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 GRHL1Q9NZI5 618 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 CNTN3Q9P232 1028 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 GTF3C4Q9UKN8 822 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 HPCAL4Q9UM19 191 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 PLXNA4Q9HCM2 1894 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 MICAL3Q7RTP6 2002 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TMEM88BA6NKF7 163 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 MEIS3P2A8K0S8 358 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TMCO5BA8MYB1 307 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 H0YCG3 227 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TREHO43280 583 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 H2AFZP0C0S5 128 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 RRM1P23921 792 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 RAP1GAPP47736 663 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 GABRB2P47870 512 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TAS2R40P59535 323 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 SLFN12LQ6IEE8 588 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 H2AFVQ71UI9 128 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 C12orf50Q8NA57 414 aaPredicted RBP7.06□□□□□ -1.28
USP46-202ENST00000451218 KLHDC9Q8NEP7 349 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 DEPTORQ8TB45 409 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 TCP11Q8WWU5 503 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 HINFPQ9BQA5 517 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 SMYD3Q9H7B4 428 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 Q9Y3F1 56 aa7.06□□□□□ -1.28
USP46-202ENST00000451218 CHD5Q8TDI0 1954 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 TACC1O75410 805 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 GPNMBQ14956 572 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 BRD3Q15059 726 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 TAF3Q5VWG9 929 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 RGMBQ6NW40 437 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CAVIN3Q969G5 261 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.05□□□□□ -1.28
USP46-202ENST00000451218 CLDN3O15551 220 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CILPO75339 1184 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 STAG3L1P0CL83 205 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 MCF2P10911 925 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 KRT13P13646 458 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 COMTP21964 271 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 ARSEP51690 589 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 MFAP3P55082 362 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 HUNKP57058 714 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CPA5Q8WXQ8 436 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 RUBCNQ92622 972 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 VWCEQ96DN2 955 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CTAGE15A4D2H0 777 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CTAGE8P0CG41 777 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 MLLT3P42568 568 aaPredicted RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 CARSP49589 748 aaKnown RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 RPL7AP62424 266 aaKnown RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 ENOSF1Q7L5Y1 443 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 TLK2Q86UE8 772 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CTAGE6Q86UF2 777 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CTAGE4Q8IX94 777 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 NLRP4Q96MN2 994 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 NT5C1BQ96P26 610 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 AAASQ9NRG9 546 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CISHQ9NSE2 258 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 PCDHB2Q9Y5E7 798 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 SMIM35A0A1B0GVV1 85 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 PTGESO14684 152 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms