RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 C18orf25Q96B23 403 aaPredicted RBP10.36□□□□□ -0.75
RFC4-210ENST00000449502 NOX5Q96PH1 765 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 GAD1Q99259 594 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 ARID3AQ99856 593 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 HIPK3Q9H422 1215 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 VRTNQ9H8Y1 702 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 RSAD1Q9HA92 442 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 CISHQ9NSE2 258 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
RFC4-210ENST00000449502 TUBGCP4Q9UGJ1 667 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 INTUQ9ULD6 942 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 POLIQ9UNA4 740 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 CEP83Q9Y592 693 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 DOCK3Q8IZD9 2030 aa10.36□□□□□ -0.75
RFC4-210ENST00000449502 UMODL1Q5DID0 1318 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 CTAGE9A4FU28 777 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 MEFVO15553 781 aaPredicted RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 ZNF623O75123 536 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 CD19P15391 556 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 ACO1P21399 889 aaKnown RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 ASPAP45381 313 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 GJA8P48165 433 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 TAF6P49848 677 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 DSC3Q14574 896 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 ZBTB6Q15916 424 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 SV2CQ496J9 727 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 ZNF394Q53GI3 561 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 C9orf57Q5W0N0 161 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 GLB1LQ6UWU2 654 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 MRPL10Q7Z7H8 261 aaKnown RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 ECHDC2Q86YB7 292 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 RNF10Q8N5U6 811 aaKnown RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 EPS8L1Q8TE68 723 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 LPPQ93052 612 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 TRIM11Q96F44 468 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 ZMAT2Q96NC0 199 aaKnown RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 XYLT2Q9H1B5 865 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 FAM124BQ9H5Z6 455 aaPredicted RBP10.35□□□□□ -0.75
RFC4-210ENST00000449502 C11orf49Q9H6J7 331 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 LRFN2Q9ULH4 789 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 ATP11BQ9Y2G3 1177 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 SNX9Q9Y5X1 595 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 MYH11P35749 1972 aa10.35□□□□□ -0.75
RFC4-210ENST00000449502 ZNF263O14978 683 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 PJA2O43164 708 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 MGEA5O60502 916 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 HUS1O60921 280 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 RTN2O75298 545 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 EOMESO95936 686 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 MMEP08473 750 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 TMEM253P0C7T8 217 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 ARHGAP25P42331 645 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 NSFP46459 744 aaKnown RBP10.34□□□□□ -0.75
RFC4-210ENST00000449502 RAP1GAPP47736 663 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 TLE2Q04725 743 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 TRIM60Q495X7 471 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 SLC24A5Q71RS6 500 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 ANKRD33Q7Z3H0 272 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 ABI1Q8IZP0 508 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 TRIM58Q8NG06 486 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 LNX1Q8TBB1 728 aaPredicted RBP10.34□□□□□ -0.75
RFC4-210ENST00000449502 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
RFC4-210ENST00000449502 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
RFC4-210ENST00000449502 TOX2Q96NM4 488 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 FAM193BQ96PV7 902 aaPredicted RBP10.34□□□□□ -0.75
RFC4-210ENST00000449502 BCO2Q9BYV7 579 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 SNX25Q9H3E2 840 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 SMYD3Q9H7B4 428 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 RGS18Q9NS28 235 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 RNF19AQ9NV58 838 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 TRIM10Q9UDY6 481 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 NOCTQ9UK39 431 aaKnown RBP10.34□□□□□ -0.75
RFC4-210ENST00000449502 CNTN6Q9UQ52 1028 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 PCDHB7Q9Y5E2 793 aa10.34□□□□□ -0.75
RFC4-210ENST00000449502 ATP8B3O60423 1300 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 ARHGEF37A1IGU5 675 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 ANKRD62A6NC57 917 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 ARL5CA6NH57 179 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 BTNL10A8MVZ5 291 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 KPNA7A9QM74 516 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 URI1O94763 535 aaPredicted RBP10.33□□□□□ -0.76
RFC4-210ENST00000449502 FTLP02792 175 aaPredicted RBP10.33□□□□□ -0.76
RFC4-210ENST00000449502 PAEPP09466 180 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 COL6A1P12109 1028 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 GZMAP12544 262 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 ABCB4P21439 1286 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 PAX3P23760 479 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 LRPAP1P30533 357 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 RPL9P32969 192 aaKnown RBP10.33□□□□□ -0.76
RFC4-210ENST00000449502 SCNN1GP51170 649 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 CDH8P55286 799 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 GPC5P78333 572 aa10.33□□□□□ -0.76
RFC4-210ENST00000449502 FMO1Q01740 532 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms