RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 CD207Q9UJ71 328 aa9.92□□□□□ -0.82
RFX3-207ENST00000449190 SSX2IPQ9Y2D8 614 aa9.92□□□□□ -0.82
RFX3-207ENST00000449190 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
RFX3-207ENST00000449190 COL4A4P53420 1690 aaPredicted RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 GOLGA6L19H0YKK7 550 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 TNFRSF10AO00220 468 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 PTGESO14684 152 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 MBTPS2O43462 519 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 LILRB3O75022 631 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 CLASP2O75122 1294 aaKnown RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 TADA2AO75478 443 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 EFEMP2O95967 443 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 SOD2P04179 222 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 CDK11BP21127 795 aaKnown RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 MTIF2P46199 727 aaKnown RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 NDUFV1P49821 464 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 ZNF165P49910 485 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 MYL5Q02045 173 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 TCERG1LQ5VWI1 586 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 DCLRE1AQ6PJP8 1040 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 ZC3H3Q8IXZ2 948 aaKnown RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 GPR65Q8IYL9 337 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 PARD3BQ8TEW8 1205 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 BCL7CQ8WUZ0 217 aaPredicted RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 ZMAT2Q96NC0 199 aaKnown RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 PPP1R10Q96QC0 940 aaKnown RBP9.91□□□□□ -0.82
RFX3-207ENST00000449190 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 BPIFA3Q9BQP9 254 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 DPP3Q9NY33 737 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 PRKAG3Q9UGI9 489 aa9.91□□□□□ -0.82
RFX3-207ENST00000449190 CASTOR2A6NHX0 329 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 IKBKBO14920 756 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 TRAPPC3O43617 180 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 TBX10O75333 385 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 CLSTN1O94985 981 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 GLP2RO95838 553 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 KRT19P08727 400 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 IL9P15248 144 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 HOXB8P17481 243 aaPredicted RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 PAX3P23760 479 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 GTF2H1P32780 548 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 RBP5P82980 135 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 CETN1Q12798 172 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 BFSP1Q12934 665 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 SMAD4Q13485 552 aaKnown RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 BIRC3Q13489 604 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 TRPC3Q13507 836 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 NAB2Q15742 525 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 ZBTB6Q15916 424 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 DCAF17Q5H9S7 520 aaPredicted RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 ANKRD54Q6NXT1 300 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 PPFIBP1Q86W92 1011 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 RNF168Q8IYW5 571 aaPredicted RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 AOPEPQ8N6M6 819 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 CASP10Q92851 521 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 C18orf25Q96B23 403 aaPredicted RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 KLHL5Q96PQ7 755 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 HERC2P3Q9BVR0 1158 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 VN1R3Q9BXE9 311 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 EMILIN2Q9BXX0 1053 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 MRPL17Q9NRX2 175 aaKnown RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 INTS13Q9NVM9 706 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 MARCH5Q9NX47 278 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.82
RFX3-207ENST00000449190 NFE2L3Q9Y4A8 694 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 NUB1Q9Y5A7 615 aa9.9□□□□□ -0.82
RFX3-207ENST00000449190 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.9□□□□□ -0.82
RFX3-207ENST00000449190 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 ARHGEF37A1IGU5 675 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 LRRIQ3A6PVS8 624 aaPredicted RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 PODXLO00592 558 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 B3GAT3O94766 335 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 C1RP00736 705 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 NFICP08651 508 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 EEF1GP26641 437 aaKnown RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 CA8P35219 290 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 PNPLA4P41247 253 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 ZNF445P59923 1031 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 DSG1Q02413 1049 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 MYO1EQ12965 1108 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 PTPN14Q15678 1187 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 SMAD2Q15796 467 aaKnown RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 USP41Q3LFD5 358 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 KIAA0319Q5VV43 1072 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 LMBRD2Q68DH5 695 aaPredicted RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 FUT10Q6P4F1 479 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 TAS1R1Q7RTX1 841 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 TRAPPC11Q7Z392 1133 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 EFCAB13Q8IY85 973 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 SMRP1Q8NCR6 262 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 CCDC150Q8NCX0 1101 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 VN1R2Q8NFZ6 395 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 SLC22A17Q8WUG5 538 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 AUTS2Q8WXX7 1259 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 CNOT6LQ96LI5 555 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms