RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 MPZL3Q6UWV2 235 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 LONP2Q86WA8 852 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 SHKBP1Q8TBC3 707 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 ZBTB45Q96K62 511 aaPredicted RBP19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 C8orf33Q9H7E9 229 aaPredicted RBP19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 PTPRHQ9HD43 1115 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 CNTN3Q9P232 1028 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 ANKFY1Q9P2R3 1169 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 MAFFQ9ULX9 164 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 YIPF1Q9Y548 306 aa19.68■□□□□ 0.74
CHCHD3-203ENST00000448878 CACNA1BQ00975 2339 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 CHADO15335 359 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 OR4Q2P0C623 313 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 ALDH1A3P47895 512 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 EPHB3P54753 998 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 YWHAHQ04917 246 aaPredicted RBP19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 SPAG1Q07617 926 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 STRN3Q13033 797 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 AASDHQ4L235 1098 aaPredicted RBP19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 TTC38Q5R3I4 469 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 C1orf228Q6PIY5 440 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 Q6ZS52 159 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 USP37Q86T82 979 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 SNX29Q8TEQ0 813 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 MSANTD3Q96H12 275 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 TRPV4Q9HBA0 871 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 PCDHB8Q9UN66 801 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 DNM3Q9UQ16 869 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 NCANO14594 1321 aa19.67■□□□□ 0.74
CHCHD3-203ENST00000448878 SFI1A8K8P3 1242 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 E9PMD0 336 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 AXIN1O15169 862 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 SLC16A4O15374 487 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 EPHA5P54756 1037 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 ANAPC15P60006 121 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 DUSP4Q13115 394 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 PLD1Q13393 1074 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 TAS1R3Q7RTX0 852 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 HAUS6Q7Z4H7 955 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 ARID3BQ8IVW6 561 aaPredicted RBP19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 FAM160A2Q8N612 972 aaPredicted RBP19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 RSPRY1Q96DX4 576 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 ZFYVE19Q96K21 471 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 C8orf76Q96K31 380 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 DRC1Q96MC2 740 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 ATXN3LQ9H3M9 355 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 TUBGCP4Q9UGJ1 667 aa19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 RBM19Q9Y4C8 960 aaKnown RBP19.66■□□□□ 0.74
CHCHD3-203ENST00000448878 COL4A2P08572 1712 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 SPECC1L-ADORA2AF8WAN1 911 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 NEK4P51957 841 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 ORC2Q13416 577 aaPredicted RBP19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 PON2Q15165 354 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 DGKKQ5KSL6 1271 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 STXBP5Q5T5C0 1151 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 DSTYKQ6XUX3 929 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 TMEM130Q8N3G9 435 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 C12orf50Q8NA57 414 aaPredicted RBP19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 DDX1Q92499 740 aaKnown RBP19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 GTSE1Q9NYZ3 720 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 SLC27A5Q9Y2P5 690 aa19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 PDCD11Q14690 1871 aaKnown RBP19.65■□□□□ 0.74
CHCHD3-203ENST00000448878 K7ESF4 209 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 ARNTLO00327 626 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 FXR2P51116 673 aaKnown RBP eCLIP19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 MLLT6P55198 1093 aaPredicted RBP19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 RAD51AP2Q09MP3 1159 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 NBR1Q14596 966 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 ZRSR1Q15695 479 aaKnown RBP19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 CCDC6Q16204 474 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 SLC10A6Q3KNW5 377 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 TXNDC11Q6PKC3 985 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 RAB34Q9BZG1 259 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 ARHGAP28Q9P2N2 729 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 NOL7Q9UMY1 257 aaKnown RBP19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 STK24Q9Y6E0 443 aa19.64■□□□□ 0.73
CHCHD3-203ENST00000448878 RALGAPA1Q6GYQ0 2036 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 FOXD2O60548 495 aaPredicted RBP19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 PROZP22891 400 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 CTHP32929 405 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 NOLC1Q14978 699 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 ARHGAP29Q52LW3 1261 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 ARHGAP15Q53QZ3 475 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 GPR158Q5T848 1215 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 RALGPS2Q86X27 583 aaPredicted RBP19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 DAW1Q8N136 415 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 KIF12Q96FN5 646 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 RUSC1Q9BVN2 902 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 ARRDC1-AS1Q9H2J1 176 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 FOXP1Q9H334 677 aaPredicted RBP19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 C2orf42Q9NWW7 574 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 SPTBN2O15020 2390 aa19.63■□□□□ 0.73
CHCHD3-203ENST00000448878 MYBPHLA2RUH7 354 aa19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 CLDN3O15551 220 aa19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 MEFVO15553 781 aaPredicted RBP19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 TOM1L1O75674 476 aa19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 CXCL8P10145 99 aa19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 GABRR2P28476 465 aa19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 HOXC13P31276 330 aa19.62■□□□□ 0.73
CHCHD3-203ENST00000448878 PXNP49023 591 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms