RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RMND5AQ9H871 391 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 LATS2Q9NRM7 1088 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 RPS6KA6Q9UK32 745 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TMCO1Q9UM00 188 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 RUVBL2Q9Y230 463 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 FAM187AA6NFU0 413 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CCT8L1PA6NM43 557 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 AP3D1O14617 1153 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 RB1P06400 928 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 NFICP08651 508 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 GTF2H1P32780 548 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SLC7A5Q01650 507 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ARID5BQ14865 1188 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ERMARDQ5T6L9 678 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 IRAK1BP1Q5VVH5 260 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 MARK2Q7KZI7 788 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 RORBQ92753 470 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 KRT35Q92764 455 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 USP13Q92995 863 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CHID1Q9BWS9 393 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 NOL6Q9H6R4 1146 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 CDH16O75309 829 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 EIF3EP60228 445 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 RGS1Q08116 209 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ABRQ12979 859 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TRAF3Q13114 568 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 BYSLQ13895 437 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF671Q8TAW3 534 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 STN1Q9H668 368 aaKnown RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SLC39A2Q9NP94 309 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 NDUFS3O75489 264 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 PFKFB1P16118 471 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ROR1Q01973 937 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 KCNT1Q5JUK3 1230 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ERICH5Q6P6B1 374 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 PI4K2BQ8TCG2 481 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 C1orf232A0A0U1RR37 186 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SLC27A2O14975 620 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TRIP13Q15645 432 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ANO4Q32M45 955 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 UTS2BQ765I0 119 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TCAIMQ8N3R3 496 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-202ENST00000448238 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 SETD9Q8NE22 299 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 PPP1R36Q96LQ0 422 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 BDH2Q9BUT1 245 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 WNT8AQ9H1J5 351 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 TPRKBQ9Y3C4 175 aa9.33□□□□□ -0.92
NIPBL-202ENST00000448238 GPAA1O43292 621 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TPD52L2O43399 206 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ATP1A1P05023 1023 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 MAPK1P28482 360 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 AP3B2Q13367 1082 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF235Q14590 738 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 WNK4Q96J92 1243 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PSMD11O00231 422 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 MYL4P12829 197 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TBXAS1P24557 533 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ANKRD26P1Q6NSI1 321 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 RFX8Q6ZV50 586 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TMEM35BQ8NCS4 154 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PCDH18Q9HCL0 1135 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 POLR1DQ9Y2S0 133 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ERICH3Q5RHP9 1530 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PTGDRQ13258 359 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 EZH2Q15910 746 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 DCAF4L1Q3SXM0 396 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CAB39LQ9H9S4 337 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 NACADO15069 1562 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 SEC31AO94979 1220 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ALDH1A1P00352 501 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CRKP46108 304 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TGM3Q08188 693 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ACCSLQ4AC99 568 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 LPCAT2Q7L5N7 544 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 IFNEQ86WN2 208 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 SPAG16Q8N0X2 631 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 MXD3Q9BW11 206 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 APOL6Q9BWW8 343 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 NUAK2Q9H093 628 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TOPORSQ9NS56 1045 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CMTM6Q9NX76 183 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PFASO15067 1338 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 EPRSP07814 1512 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 SGSM2O43147 1006 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PRMT3O60678 531 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CCNB2O95067 398 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 GNAT1P11488 350 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PCNX4Q63HM2 1172 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 OSBPL8Q9BZF1 889 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms