RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 KCTD2Q14681 263 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 C2CD6Q53TS8 623 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 TTC19Q6DKK2 380 aaPredicted RBP17.33■□□□□ 0.36
OTUB1-204ENST00000447683 SMYD5Q6GMV2 418 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 MOB2Q70IA6 237 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 LRRC71Q8N4P6 559 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 ARFGAP2Q8N6H7 521 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 CDCA5Q96FF9 252 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 TCHPQ9BT92 498 aa17.33■□□□□ 0.36
OTUB1-204ENST00000447683 PABPC3Q9H361 631 aaKnown RBP17.33■□□□□ 0.36
OTUB1-204ENST00000447683 MRPL47Q9HD33 250 aaKnown RBP17.33■□□□□ 0.36
OTUB1-204ENST00000447683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
OTUB1-204ENST00000447683 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.36
OTUB1-204ENST00000447683 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 THAP12O43422 761 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 ZEB2O60315 1214 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 SLC26A2P50443 739 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 PHLDB2Q86SQ0 1253 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 BCAS4Q8TDM0 211 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 ZNF606Q8WXB4 792 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 ART4Q93070 314 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 JPH2Q9BR39 696 aaPredicted RBP17.32■□□□□ 0.36
OTUB1-204ENST00000447683 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 NF2P35240 595 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 MDH1P40925 334 aaKnown RBP17.32■□□□□ 0.36
OTUB1-204ENST00000447683 KCNJ1P48048 391 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 MMS22LQ6ZRQ5 1243 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 SPATA33Q96N06 139 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 MTMR12Q9C0I1 747 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 PTPRHQ9HD43 1115 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 MTRF1LQ9UGC7 380 aaKnown RBP17.32■□□□□ 0.36
OTUB1-204ENST00000447683 SCINQ9Y6U3 715 aa17.32■□□□□ 0.36
OTUB1-204ENST00000447683 CCDC189A1A4V9 331 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 SRRM3A6NNA2 597 aaPredicted RBP17.31■□□□□ 0.36
OTUB1-204ENST00000447683 PSTPIP1O43586 416 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 ECEL1O95672 775 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 OSBPP22059 807 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 SGO2Q562F6 1265 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 GPAT2Q6NUI2 795 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 TSHZ1Q6ZSZ6 1077 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 FASTKD5Q7L8L6 764 aaKnown RBP17.31■□□□□ 0.36
OTUB1-204ENST00000447683 FBXO16Q8IX29 292 aaPredicted RBP17.31■□□□□ 0.36
OTUB1-204ENST00000447683 CENPHQ9H3R5 247 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 FZD8Q9H461 694 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 SMARCAD1Q9H4L7 1026 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 MROH8Q9H579 483 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 ACKR2O00590 384 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 HOXC6P09630 235 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 LSP1P33241 339 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 MAP2K2P36507 400 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 MYL6P60660 151 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 GUCY1A3Q02108 690 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 SGSM1Q2NKQ1 1148 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 EP400NLQ6ZTU2 488 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
OTUB1-204ENST00000447683 HERPUD2Q9BSE4 406 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 NIF3L1Q9GZT8 377 aa17.31■□□□□ 0.36
OTUB1-204ENST00000447683 HBP1O60381 514 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 MMP8P22894 467 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 MAN1A1P33908 653 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 KRT71Q3SY84 523 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 MPZL3Q6UWV2 235 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 RHPN2Q8IUC4 686 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 RHOT1Q8IXI2 618 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 C1orf54Q8WWF1 131 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 RNF25Q96BH1 459 aaPredicted RBP17.3■□□□□ 0.36
OTUB1-204ENST00000447683 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 SLC12A6Q9UHW9 1150 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 PTPN22Q9Y2R2 807 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 ZSWIM8A7E2V4 1837 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 SSTR3P32745 418 aaPredicted RBP17.3■□□□□ 0.36
OTUB1-204ENST00000447683 TFDP1Q14186 410 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 SYDE1Q6ZW31 735 aaPredicted RBP17.3■□□□□ 0.36
OTUB1-204ENST00000447683 FEZF2Q8TBJ5 459 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 COPS5Q92905 334 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 TLCD1Q96CP7 247 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 LRRC4CQ9HCJ2 640 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 PARVAQ9NVD7 372 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 WHRNQ9P202 907 aa17.3■□□□□ 0.36
OTUB1-204ENST00000447683 B4GALT4O60513 344 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 LSM8O95777 96 aaKnown RBP17.29■□□□□ 0.36
OTUB1-204ENST00000447683 TAS2R40P59535 323 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 IFFO1Q0D2I5 559 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 KLF1Q13351 362 aaPredicted RBP17.29■□□□□ 0.36
OTUB1-204ENST00000447683 KATNAL2Q8IYT4 538 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 SHCBP1Q8NEM2 672 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 TRAPPC12Q8WVT3 735 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 DCLK3Q9C098 648 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 EPN3Q9H201 632 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 CHST7Q9NS84 486 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 NOVA2Q9UNW9 492 aaKnown RBP17.29■□□□□ 0.36
OTUB1-204ENST00000447683 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 TLR3O15455 904 aaKnown RBP17.29■□□□□ 0.36
OTUB1-204ENST00000447683 ASAP2O43150 1006 aa17.29■□□□□ 0.36
OTUB1-204ENST00000447683 TXNP10599 105 aaKnown RBP17.29■□□□□ 0.36
OTUB1-204ENST00000447683 HPDP32754 393 aaPredicted RBP17.29■□□□□ 0.36
OTUB1-204ENST00000447683 CCT5P48643 541 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms