RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 FANCEQ9HB96 536 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 C12orf4Q9NQ89 552 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CNOT11Q9UKZ1 510 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 ARID1AO14497 2285 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 DDX3XO00571 662 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-203ENST00000447540 MED26O95402 600 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ENO2P09104 434 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 TSHRP16473 764 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CDK9P50750 372 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 HERC3Q15034 1050 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KLHL38Q2WGJ6 581 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CDH24Q86UP0 819 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SH2D3CQ8N5H7 860 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 GIMAP8Q8ND71 665 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 TSR2Q969E8 191 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 RMND5BQ96G75 393 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 DNAJC7Q99615 494 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 DHRS9Q9BPW9 319 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ERP44Q9BS26 406 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 VPS11Q9H270 941 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TRIM45Q9H8W5 580 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 GDAP2Q9NXN4 497 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SNX5Q9Y5X3 404 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ENC1O14682 589 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KATNA1O75449 491 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TTC4O95801 387 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SERPINB2P05120 415 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 RRM2P31350 389 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 NFE2Q16621 373 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 EDRF1Q3B7T1 1238 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TNNI3KQ59H18 835 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 RESP18Q5W5W9 173 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 STK32CQ86UX6 486 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CREG2Q8IUH2 290 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ARHGEF19Q8IW93 802 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 LINS1Q8NG48 757 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 FAM172AQ8WUF8 416 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CALML4Q96GE6 196 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ZNF570Q96NI8 536 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TCF12Q99081 682 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 PDCD10Q9BUL8 212 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TRAF4Q9BUZ4 470 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 NT5C3AQ9H0P0 336 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 GBA3Q9H227 469 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 HIPK3Q9H422 1215 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TLE6Q9H808 572 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SP140LQ9H930 580 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 DDX28Q9NUL7 540 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 SF3B1O75533 1304 aaKnown RBP eCLIP3.06□□□□□ -1.925e-6■■■■■ 77.9
CHD9-203ENST00000447540 DENND4BO75064 1496 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 RTL9Q8NET4 1388 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SENP3-EIF4A1A0A087X0R7 540 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ZNF233A6NK53 670 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 BET1O15155 118 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 PABPC1P11940 636 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 HOXA10P31260 410 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 IL12RB1P42701 662 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 RPL10AP62906 217 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 CDKAL1Q5VV42 579 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 RRAGBQ5VZM2 374 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 BEND5Q7L4P6 421 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 EPM2AIP1Q7L775 607 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 CABP7Q86V35 215 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 PCYOX1LQ8NBM8 494 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SIMC1Q8NDZ2 872 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 NCLNQ969V3 563 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ZNF317Q96PQ6 595 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 ALG1Q9BT22 464 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 LRRC1Q9BTT6 524 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TBC1D10AQ9BXI6 508 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 MRPL44Q9H9J2 332 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 EHD3Q9NZN3 535 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TELO2Q9Y4R8 837 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 DUOX2Q9NRD8 1548 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TM9SF1O15321 606 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ADCY6O43306 1168 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KRT1P04264 644 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ITGB1P05556 798 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KRT13P13646 458 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ZNF23P17027 643 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 POLR2CP19387 275 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 PTPREP23469 700 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SLC9A3P48764 834 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 FKBP3Q00688 224 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 CHRNEQ04844 493 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 HSPA14Q0VDF9 509 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SEMA3AQ14563 771 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SIGIRRQ6IA17 410 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 IZUMO2Q6UXV1 221 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ANKK1Q8NFD2 765 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 LILRB1Q8NHL6 650 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 DPH5Q9H2P9 285 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TMEM245Q9H330 911 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KCNN3Q9UGI6 736 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 FETUBQ9UGM5 382 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 LRRIQ1Q96JM4 1722 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ZMYM2Q9UBW7 1377 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 A0A0A6YYK5 440 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 PDZK1P1A8MUH7 402 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ZBTB43O43298 467 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms