RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ACP6Q9NPH0 428 aa8.13□□□□□ -1.11
SF3A3P1-201ENST00000446317 MARCH5Q9NX47 278 aa8.13□□□□□ -1.11
SF3A3P1-201ENST00000446317 HMGXB4Q9UGU5 601 aa8.13□□□□□ -1.11
SF3A3P1-201ENST00000446317 COLQQ9Y215 455 aaPredicted RBP8.13□□□□□ -1.11
SF3A3P1-201ENST00000446317 FAN1Q9Y2M0 1017 aa8.13□□□□□ -1.11
SF3A3P1-201ENST00000446317 ANK1P16157 1881 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 CYB561D2O14569 222 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 STX10O60499 249 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 OR4Q2P0C623 313 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 KRT5P13647 590 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 TKTP29401 623 aaKnown RBP8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 ADKP55263 362 aaKnown RBP8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 PSMC1P62191 440 aaKnown RBP8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 TNNC1P63316 161 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 UPP1Q16831 310 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 WDR44Q5JSH3 913 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 TRIM65Q6PJ69 517 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 PRSS55Q6UWB4 352 aaPredicted RBP8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 OSTM1Q86WC4 334 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 NEK11Q8NG66 645 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 LMO3Q8TAP4 145 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 ARNTL2Q8WYA1 636 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 ZNF689Q96CS4 500 aaPredicted RBP8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 KREMEN1Q96MU8 473 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 TMEM209Q96SK2 561 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 SLC9A7Q96T83 725 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 VN1R3Q9BXE9 311 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 GPR62Q9BZJ7 368 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 MTIF3Q9H2K0 278 aaKnown RBP8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 DPEP3Q9H4B8 488 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 DNAJC12Q9UKB3 198 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 ITGA11Q9UKX5 1188 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 SIK3Q9Y2K2 1263 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 C2CD2Q9Y426 696 aa8.12□□□□□ -1.11
SF3A3P1-201ENST00000446317 ANO9A1A5B4 782 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 LINC01553A4QN01 128 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 EPOPA6NHQ4 379 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 PIRO00625 290 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 HOXA2O43364 376 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 CBFA2T2O43439 604 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 EFCAB14O75071 495 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 ATP2C2O75185 946 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 GFPT2O94808 682 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 NOL4O94818 638 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 ALDH2P05091 517 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 SKILP12757 684 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 RGS19P49795 217 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 TAF6P49848 677 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 MRE11P49959 708 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 FXR1P51114 621 aaKnown RBP eCLIP8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 CLDN10P78369 228 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 DSC1Q08554 894 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 UVSSAQ2YD98 709 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 ZNF667Q5HYK9 610 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 KLHDC7AQ5VTJ3 777 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 FAM171A1Q5VUB5 890 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 TAF3Q5VWG9 929 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 FOXR2Q6PJQ5 311 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 KCNT2Q6UVM3 1135 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 USP37Q86T82 979 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 DNAAF5Q86Y56 855 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 CD302Q8IX05 232 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 STKLD1Q8NE28 680 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 GDPD5Q8WTR4 605 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 TMEM174Q8WUU8 243 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 SENP8Q96LD8 212 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 ZNF558Q96NG5 402 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 NT5C1BQ96P26 610 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 RAD9AQ99638 391 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 RHOBTB2Q9BYZ6 727 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 GANQ9H2C0 597 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 RC3H2Q9HBD1 1191 aaKnown RBP8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 PLCB1Q9NQ66 1216 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 SLC38A7Q9NVC3 462 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 L1RE1Q9UN81 338 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 DERAQ9Y315 318 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 INSL6Q9Y581 213 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 NME7Q9Y5B8 376 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 RALGAPA2Q2PPJ7 1873 aa8.11□□□□□ -1.11
SF3A3P1-201ENST00000446317 KPNA7A9QM74 516 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 XPOTO43592 962 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 N4BP1O75113 896 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 ASS1P00966 412 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 TRIM21P19474 475 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 DNAJB1P25685 340 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 LMO2P25791 158 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 CASP14P31944 242 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 GTF2H1P32780 548 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 PBX1P40424 430 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 ASPAP45381 313 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 ALDH7A1P49419 539 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 LILRA4P59901 499 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 HTRA4P83105 476 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms