RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 GPR25O00155 361 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 TLR3O15455 904 aaKnown RBP17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 TAS2R40P59535 323 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 PPP1R7Q15435 360 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 ALS2CLQ60I27 953 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 ZPBP2Q6X784 338 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 RPS6KC1Q96S38 1066 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 ERP44Q9BS26 406 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 CHST7Q9NS84 486 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 ERAP1Q9NZ08 941 aa17.9■□□□□ 0.46
LAPTM4B-201ENST00000445593 FAM189A1O60320 539 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 PHF2O75151 1096 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 PSMC4P43686 418 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 PPFIA1Q13136 1202 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 SGO2Q562F6 1265 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 FAM182AQ5T1J6 154 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 CDT1Q9H211 546 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 PCDHA3Q9Y5H8 950 aa17.89■□□□□ 0.46
LAPTM4B-201ENST00000445593 TLDC2A0PJX2 215 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 ACTN2P35609 894 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 GNGT1P63211 74 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 ARHGAP1Q07960 439 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 MPZL3Q6UWV2 235 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 HAUS1Q96CS2 278 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 FAM107BQ9H098 131 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 RAB17Q9H0T7 212 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 ASS1P00966 412 aaKnown RBP17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 HOXC6P09630 235 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 RPL21P46778 160 aaKnown RBP17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 BPIFB4P59827 614 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 IFFO1Q0D2I5 559 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 MON1BQ7L1V2 547 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 TFAP2BQ92481 460 aa17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 CPSF3Q9UKF6 684 aaKnown RBP17.89■□□□□ 0.45
LAPTM4B-201ENST00000445593 GOLGA6L10A6NI86 522 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 GOLGA8KD6RF30 607 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 HBP1O60381 514 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 LGR5O75473 907 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 HADHBP55084 474 aaKnown RBP17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 PLPPR4Q7Z2D5 763 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 BRI3BPQ8WY22 251 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 MCEEQ96PE7 176 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 MTUS1Q9ULD2 1270 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 ITGB3P05106 788 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 HSPA9P38646 679 aaKnown RBP17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 GUCY1A3Q02108 690 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 CENPCQ03188 943 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 MBTD1Q05BQ5 628 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 MAMLD1Q13495 774 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 TFDP1Q14186 410 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 ODF2Q5BJF6 829 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 WDR49Q8IV35 697 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 SH3GL2Q99962 352 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 RPF1Q9H9Y2 349 aaKnown RBP17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 HMGXB4Q9UGU5 601 aa17.88■□□□□ 0.45
LAPTM4B-201ENST00000445593 ASB14A6NK59 587 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ACKR2O00590 384 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 C22orf31O95567 290 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 TNNC2P02585 160 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 RALAP11233 206 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ATF7P17544 494 aaPredicted RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 TBXAS1P24557 533 aaPredicted RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ABCD1P33897 745 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 DCUN1D2Q6PH85 259 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 TMC3Q7Z5M5 1100 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 NIF3L1Q9GZT8 377 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ASIC3Q9UHC3 531 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 TTC7AQ9ULT0 858 aaPredicted RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 KIAA0391O15091 583 aaKnown RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 CYP1A1P04798 512 aaPredicted RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 KRT10P13645 584 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 LACTBP83111 547 aaPredicted RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 KIZQ2M2Z5 673 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 KRT71Q3SY84 523 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 CDCA2Q69YH5 1023 aaPredicted RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 KCNV1Q6PIU1 500 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 LRRC31Q6UY01 552 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 LRRC45Q96CN5 670 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 PNMA3Q9UL41 463 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 DIS3Q9Y2L1 958 aaKnown RBP17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 DCDC2CA8MYV0 355 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ABLIM1O14639 778 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 SLCO1A2P46721 670 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 MCL1Q07820 350 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 TAPT1Q6NXT6 567 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ANKS1BQ7Z6G8 1248 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 ANKRD36BP1Q96IX9 119 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 PWWP2AQ96N64 755 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 CAPS2Q9BXY5 557 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 SMYD3Q9H7B4 428 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 FAM114A2Q9NRY5 505 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 RASAL2Q9UJF2 1139 aa17.87■□□□□ 0.45
LAPTM4B-201ENST00000445593 LACTBL1A8MY62 500 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 SHBGP04278 402 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 STAG3L1P0CL83 205 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 COILP38432 576 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms