RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 MRPL50Q8N5N7 158 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 INO80BQ9C086 356 aaPredicted RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 ARMT1Q9H993 441 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 MTRRQ9UBK8 725 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 FNDC3AQ9Y2H6 1198 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 ATXN2Q99700 1313 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 GSTTP1A0A1W2PQM5 241 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 B4E1Z4 1266 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 PRPF3O43395 683 aaKnown RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 DIAPH2O60879 1101 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 SOX9P48436 509 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 TPGS2Q68CL5 300 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 CATIPQ7Z7H3 387 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 SUPT16HQ9Y5B9 1047 aaKnown RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC4A4Q9Y6R1 1079 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 SETD2Q9BYW2 2564 aaPredicted RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 CNTNAP5Q8WYK1 1306 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 IGHV1OR15-9A0A0B4J2B8 117 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 EIF2DP41214 584 aaKnown RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 EXOSC9Q06265 439 aaKnown RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 PSMD5Q16401 504 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 BORAQ6PGQ7 559 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC41A1Q8IVJ1 513 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 EFCAB3Q8N7B9 438 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 OR2I1PQ8NGU4 316 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 C9orf43Q8TAL5 461 aaPredicted RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 CNDP2Q96KP4 475 aaKnown RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 CXXC4Q9H2H0 198 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 AZI2Q9H6S1 392 aa7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 KLF2Q9Y5W3 355 aaPredicted RBP7.22□□□□□ -1.25
BRAFP1-201ENST00000445336 DPYSL4O14531 572 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 DDHD2O94830 711 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 FAM87AP0C7U9 286 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 DARSP14868 501 aaKnown RBP7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 TCF3P15923 654 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 HOXC13P31276 330 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 ZNF543Q08ER8 600 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 PLCB4Q15147 1175 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 CYFIP1Q7L576 1253 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 TAS1R1Q7RTX1 841 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 BIVMQ86UB2 503 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 NOSTRINQ8IVI9 506 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 TRIML1Q8N9V2 468 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 LNX1Q8TBB1 728 aaPredicted RBP7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 CCDC51Q96ER9 411 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 OXCT2Q9BYC2 517 aaPredicted RBP7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC29A3Q9BZD2 475 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 TPSD1Q9BZJ3 242 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 EVA1BQ9NVM1 165 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 HCFC1R1Q9NWW0 138 aa7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 MN1Q10571 1320 aaPredicted RBP7.21□□□□□ -1.25
BRAFP1-201ENST00000445336 FAM171A2A8MVW0 826 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 C7P10643 843 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 DDX6P26196 483 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 GRIA4P48058 902 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 GALK1P51570 392 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 INSM1Q01101 510 aaPredicted RBP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 TSHZ3Q63HK5 1081 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 IQCEQ6IPM2 695 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 TRIM50Q86XT4 487 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 OXR1Q8N573 874 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 KRI1Q8N9T8 703 aaKnown RBP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 EXTL1Q92935 676 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 TTC14Q96N46 770 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 ZSWIM6Q9HCJ5 1215 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 BMP2KQ9NSY1 1161 aaPredicted RBP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 GMIPQ9P107 970 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 ADAM28Q9UKQ2 775 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 SLC5A6Q9Y289 635 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 ASB3Q9Y575 518 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 DOCK5Q9H7D0 1870 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 SPATA31D3P0C874 917 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 PRF1P14222 555 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 CD82P27701 267 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 PER3P56645 1201 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 USP4Q13107 963 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 PCBP1Q15365 356 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 SPATA31D4Q6ZUB0 917 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 FAM114A1Q8IWE2 563 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 NINJ1Q92982 152 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 RSAD1Q9HA92 442 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 FAM105AQ9NUU6 356 aa7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 DBNLQ9UJU6 430 aaKnown RBP7.21□□□□□ -1.26
BRAFP1-201ENST00000445336 TMEM189-UBE2V1I3L0A0 370 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 GP1BAP07359 652 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 CKMT2P17540 419 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 TRIM26Q12899 539 aaPredicted RBP7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 ANO7Q6IWH7 933 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 ARMCX6Q7L4S7 300 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 TGIF2LYQ8IUE0 185 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 SLC46A1Q96NT5 459 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 FSCN3Q9NQT6 498 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 PRDM8Q9NQV8 689 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 DLL4Q9NR61 685 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 NOP58Q9Y2X3 529 aaKnown RBP7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 CYP2D7A0A087X1C5 515 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 A1L4Q6 167 aa7.2□□□□□ -1.26
BRAFP1-201ENST00000445336 DDX11L8A8MPP1 907 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms