RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ACOT1Q86TX2 421 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 NT5DC4Q86YG4 428 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 TNFRSF25Q93038 417 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 TRAF3IP3Q9Y228 551 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 PTENP60484 403 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 YWHAHQ04917 246 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 LMCD1Q9NZU5 365 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 ANAPC5Q9UJX4 755 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 TNFSF13BQ9Y275 285 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 PALMO75781 387 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 ECEL1O95672 775 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 HMBSP08397 361 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 SPATA31C1P0DKV0 1188 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 BRD2P25440 801 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 SULT1E1P49888 294 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 NR1I3Q14994 352 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 FAM171A1Q5VUB5 890 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 OVOS1Q6IE37 1185 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 TTC30AQ86WT1 665 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 CYP3A43Q9HB55 503 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 NKIRAS1Q9NYS0 192 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 SH3BP1Q9Y3L3 701 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 H3BRJ5 948 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 SLC4A1P02730 911 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 PHBP35232 272 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 TRIM65Q6PJ69 517 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 RUFY4Q6ZNE9 571 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 ZNF677Q86XU0 584 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 TTC13Q8NBP0 860 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 EFCAB8A8MWE9 144 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 BASP1P80723 227 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 EXOC4Q96A65 974 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 EPAS1Q99814 870 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 AGPAT5Q9NUQ2 364 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 HEY1Q9Y5J3 304 aa14.92□□□□□ -0.02
SMARCA4-204ENST00000444061 ITIH6Q6UXX5 1313 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 LACTBL1A8MY62 500 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 SELPP16109 830 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 VEGFBP49765 207 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 MTMR3Q13615 1198 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 ACO1P21399 889 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 E2F4Q16254 413 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 EFHC1Q5JVL4 640 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 RHOT1Q8IXI2 618 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 SSU72P8A0A1W2PR75 194 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 GIPC1O14908 333 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 ARHGAP18Q8N392 663 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 MRPS31Q92665 395 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 P3H4Q92791 437 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 UMODL1Q5DID0 1318 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 IGF2BP3O00425 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 VDRP11473 427 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 KRT15P19012 456 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 GRB14Q14449 540 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 GEN1Q17RS7 908 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 GJB7Q6PEY0 223 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 PLEKHA5Q9HAU0 1116 aa14.91□□□□□ -0.02
SMARCA4-204ENST00000444061 SCNN1GP51170 649 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 SLC18A3Q16572 532 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 EPC2Q52LR7 807 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 RNF10Q8N5U6 811 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 ZBED3Q96IU2 234 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 TREHO43280 583 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 GJB1P08034 283 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 CDH6P55285 790 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 RTP1P59025 263 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 ACCSLQ4AC99 568 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 DENND2CQ68D51 928 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 ZNF558Q96NG5 402 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 HEMGNQ9BXL5 484 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 KLHL8Q9P2G9 620 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 PARNO95453 639 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 C10orf120Q5SQS8 335 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 TMEM161BQ8NDZ6 487 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 ZNF296Q8WUU4 475 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 ZBTB9Q96C00 473 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 CYFIP2Q96F07 1278 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 EFCAB14O75071 495 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 MLH1P40692 756 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 YWHAGP61981 247 aaKnown RBP eCLIP14.9□□□□□ -0.024e-6■■□□□ 13.3
SMARCA4-204ENST00000444061 CAPN12Q6ZSI9 719 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 NPLOC4Q8TAT6 608 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 CCHCR1Q8TD31 782 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 VPS18Q9P253 973 aa14.9□□□□□ -0.02
SMARCA4-204ENST00000444061 IGLV3-22A0A075B6J6 115 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 GOLGA8CPA6NN73 597 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 KLRC2P26717 231 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 PON1P27169 355 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 CLK2P49760 499 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 GTF2BQ00403 316 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 RAD51Q06609 339 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 PSMD6Q15008 389 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 OLFML2BQ68BL8 750 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 JADE1Q6IE81 842 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 MORC4Q8TE76 937 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms