RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 DDIASQ8IXT1 998 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 TUBE1Q9UJT0 475 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 VPS9D1Q9Y2B5 631 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 MYH9P35579 1960 aaKnown RBP11.79□□□□□ -0.52
FN1-211ENST00000443816 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.79□□□□□ -0.52
FN1-211ENST00000443816 FAM187AA6NFU0 413 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 APRTP07741 180 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 ZNF177Q13360 481 aaPredicted RBP11.79□□□□□ -0.52
FN1-211ENST00000443816 PDK1Q15118 436 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 GOLGA7BQ2TAP0 167 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 C4orf22Q6V702 233 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 DEFB132Q7Z7B7 95 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 SCHIP1Q9P0W5 487 aaPredicted RBP11.79□□□□□ -0.52
FN1-211ENST00000443816 ZFATQ9P243 1243 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 MAD2L2Q9UI95 211 aa11.79□□□□□ -0.52
FN1-211ENST00000443816 PDGFRAP16234 1089 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 RASA1P20936 1047 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 RPL10AP62906 217 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 MTA1Q13330 715 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 MYH2Q9UKX2 1941 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 THP07101 528 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 PTRHD1Q6GMV3 140 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 ABHD8Q96I13 439 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 OSBPL9Q96SU4 736 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 NOVA2Q9UNW9 492 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 ATP11BQ9Y2G3 1177 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 SYNCRIPO60506 623 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 RGS7P49802 495 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 INHBEP58166 350 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 NNTQ13423 1086 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 CCNYL1Q8N7R7 359 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 UVRAGQ9P2Y5 699 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 G3BP2Q9UN86 482 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 NAMPTP43490 491 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 MAPRE2Q15555 327 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 WDCPQ9H6R7 721 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 TMEM39AQ9NV64 488 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 KRT87PA6NCN2 255 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 LRRIQ3A6PVS8 624 aaPredicted RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 LMNAP02545 664 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 RPA1P27694 616 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 NPEPPSP55786 919 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 ABCE1P61221 599 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 FOXD4Q12950 439 aaPredicted RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 MAP3K13O43283 966 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 TGFB3P10600 412 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 GARTP22102 1010 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 CASP1P29466 404 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
FN1-211ENST00000443816 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 PDIA2Q13087 525 aaKnown RBP11.78□□□□□ -0.52
FN1-211ENST00000443816 KRT72Q14CN4 511 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 MCEEQ96PE7 176 aa11.78□□□□□ -0.52
FN1-211ENST00000443816 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 MYH13Q9UKX3 1938 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 CXCL11O14625 94 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 STRNO43815 780 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 PDCLQ13371 301 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 MED21Q13503 144 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 PTPN21Q16825 1174 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 CEP19Q96LK0 163 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 NR1H4Q96RI1 486 aaPredicted RBP11.77□□□□□ -0.52
FN1-211ENST00000443816 NDEL1Q9GZM8 345 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 C3P01024 1663 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.522e-43■□□□□ 8.4
FN1-211ENST00000443816 SUPT3HO75486 399 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 ALDH2P05091 517 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 PAN2Q504Q3 1202 aaKnown RBP11.77□□□□□ -0.52
FN1-211ENST00000443816 SARM1Q6SZW1 724 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 TRIM9Q9C026 710 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 YY1AP1Q9H869 796 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 GIMAP4Q9NUV9 329 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.77□□□□□ -0.52
FN1-211ENST00000443816 DEPDC5O75140 1603 aa11.77□□□□□ -0.52
FN1-211ENST00000443816 GPC2Q8N158 579 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 SYT2Q8N9I0 419 aaPredicted RBP11.77□□□□□ -0.53
FN1-211ENST00000443816 UBQLN1Q9UMX0 589 aaKnown RBP11.77□□□□□ -0.53
FN1-211ENST00000443816 CITO14578 2027 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 SYCE1LA8MT33 242 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 LINC00523Q86TU6 105 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PTPRN2Q92932 1015 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 EMILIN2Q9BXX0 1053 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms