RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 PRPF38AQ8NAV1 312 aaKnown RBP5.98□□□□□ -1.45
VPS50-206ENST00000443443 IFI44Q8TCB0 444 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 KAT5Q92993 513 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 DUSP26Q9BV47 211 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 TLR10Q9BXR5 811 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 IPPQ9Y573 584 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 ALG1L2C9J202 215 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 GABRDO14764 452 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 SGTAO43765 313 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 PEX1O43933 1283 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 PEX14O75381 377 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 ZFPL1O95159 310 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 ZNF844Q08AG5 666 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 ZNF169Q14929 603 aaPredicted RBP5.97□□□□□ -1.45
VPS50-206ENST00000443443 RAB39AQ14964 217 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 AOPEPQ8N6M6 819 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 SLC17A8Q8NDX2 589 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 NSUN7Q8NE18 718 aaKnown RBP5.97□□□□□ -1.45
VPS50-206ENST00000443443 IL17RDQ8NFM7 739 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 FUBP1Q96AE4 644 aaKnown RBP5.97□□□□□ -1.45
VPS50-206ENST00000443443 TMEM125Q96AQ2 219 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 COA7Q96BR5 231 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 IMPG2Q9BZV3 1241 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 MAN1C1Q9NR34 630 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.97□□□□□ -1.45
VPS50-206ENST00000443443 NOP58Q9Y2X3 529 aaKnown RBP5.97□□□□□ -1.45
VPS50-206ENST00000443443 PCDHB1Q9Y5F3 818 aa5.97□□□□□ -1.45
VPS50-206ENST00000443443 MASP2O00187 686 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 MAP4K4O95819 1239 aaPredicted RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 CD1AP06126 327 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 CENPBP07199 599 aaPredicted RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 EDNRBP24530 442 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 MRPS21P82921 87 aaKnown RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 SF3B3Q15393 1217 aaKnown RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 CLNKQ7Z7G1 428 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 ACTRT2Q8TDY3 377 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 SMAD5Q99717 465 aaKnown RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 VRK1Q99986 396 aaPredicted RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 BRINP2Q9C0B6 783 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 KCTD5Q9NXV2 234 aa5.96□□□□□ -1.46
VPS50-206ENST00000443443 COL11A2P13942 1736 aaPredicted RBP5.96□□□□□ -1.46
VPS50-206ENST00000443443 A0A0U1RQG5 324 aaPredicted RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 PARNO95453 639 aaKnown RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 CD38P28907 300 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 RARRES1P49788 294 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 SIM1P81133 766 aaPredicted RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 CD300EQ496F6 205 aaPredicted RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 PREPLQ4J6C6 727 aaPredicted RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 KHDC1Q4VXA5 237 aaKnown RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 SP5Q6BEB4 398 aaPredicted RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 ARHGEF25Q86VW2 580 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 PRIMA1Q86XR5 153 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 SMC5Q8IY18 1101 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 BOLLQ8N9W6 283 aaKnown RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 SSH3Q8TE77 659 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 MRGPRX4Q96LA9 322 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 BBC3Q96PG8 261 aaPredicted RBP5.95□□□□□ -1.46
VPS50-206ENST00000443443 R3HDMLQ9H3Y0 253 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 JKAMPQ9P055 326 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 SLC45A2Q9UMX9 530 aa5.95□□□□□ -1.46
VPS50-206ENST00000443443 PRAMEF33A0A0G2JMD5 474 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 CCDC194A0A1B0GVG4 234 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 TOR1BO14657 336 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 YY2O15391 372 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 PRAMEF10O60809 474 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 SLC43A1O75387 559 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 EIF3JO75822 258 aaKnown RBP5.94□□□□□ -1.46
VPS50-206ENST00000443443 KCNA2P16389 499 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 SMARCA1P28370 1054 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 ELLP55199 621 aaPredicted RBP5.94□□□□□ -1.46
VPS50-206ENST00000443443 RPS7P62081 194 aaKnown RBP5.94□□□□□ -1.46
VPS50-206ENST00000443443 ODF1Q14990 250 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 RALBP1Q15311 655 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 CCDC142Q17RM4 750 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 FLYWCH1Q4VC44 716 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 TTC7BQ86TV6 843 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 MIER2Q8N344 545 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 LNX2Q8N448 690 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 Q8NA96 180 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 TOR1AIP2Q8NFQ8 470 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 NELL1Q92832 810 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 ZNF764Q96H86 408 aaPredicted RBP5.94□□□□□ -1.46
VPS50-206ENST00000443443 FBXL20Q96IG2 436 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 KLHL32Q96NJ5 620 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 HEPHQ9BQS7 1158 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 SPATA5L1Q9BVQ7 753 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 INTS13Q9NVM9 706 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 CALCOCO1Q9P1Z2 691 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 SERPINB13Q9UIV8 391 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 KAT6AQ92794 2004 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 TNKSO95271 1327 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 WASHC2CQ9Y4E1 1318 aa5.94□□□□□ -1.46
VPS50-206ENST00000443443 ARHGEF17Q96PE2 2063 aaPredicted RBP5.94□□□□□ -1.46
VPS50-206ENST00000443443 PTMSP20962 102 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 GATA3P23771 443 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 TLE1Q04724 770 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 PIGFQ07326 219 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 KAZNQ674X7 775 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 SYCE2Q6PIF2 218 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 TSHZ1Q6ZSZ6 1077 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms