RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 EYSQ5T1H1 3165 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 PRRC2BQ5JSZ5 2229 aaKnown RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 KPNA7A9QM74 516 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 TEX28O15482 410 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 PHACTR2O75167 634 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 SLC34A2O95436 690 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 PTMSP20962 102 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 AP3M2P53677 418 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 BFSP1Q12934 665 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 CTC1Q2NKJ3 1217 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 SV2CQ496J9 727 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 LLGL2Q6P1M3 1020 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 FOXR2Q6PJQ5 311 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 ANKS3Q6ZW76 656 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 PPFIBP1Q86W92 1011 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 ZNF560Q96MR9 790 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 CEP63Q96MT8 703 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 CLSTN3Q9BQT9 956 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 UBE2ZQ9H832 354 aaPredicted RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 RWDD2AQ9UIY3 292 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 COG5Q9UP83 839 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 TIMM13Q9Y5L4 95 aaPredicted RBP13.29□□□□□ -0.28
USP1-203ENST00000442679 COL6A3P12111 3177 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
USP1-203ENST00000442679 H7C4K7 107 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 CYB561D2O14569 222 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 IKBKBO14920 756 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 ABCB7O75027 752 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 CST3P01034 146 aaPredicted RBP13.28□□□□□ -0.28
USP1-203ENST00000442679 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
USP1-203ENST00000442679 ADH1AP07327 375 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 TRIM49P0CI25 452 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 TRIM49CP0CI26 452 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 ODC1P11926 461 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 NDUFV1P49821 464 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
USP1-203ENST00000442679 ENPEPQ07075 957 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 MYO1EQ12965 1108 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 BIRC3Q13489 604 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 TRPC3Q13507 836 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 MRPL58Q14197 206 aaKnown RBP13.28□□□□□ -0.28
USP1-203ENST00000442679 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 GLYCTKQ8IVS8 523 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 VN1R2Q8NFZ6 395 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 SLC22A17Q8WUG5 538 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 HPDLQ96IR7 371 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 MTRRQ9UBK8 725 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 BACE2Q9Y5Z0 518 aa13.28□□□□□ -0.28
USP1-203ENST00000442679 ARHGEF37A1IGU5 675 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 GLP2RO95838 553 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 SRGAP2BP0DMP2 458 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 TYMPP19971 482 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 KCNA5P22460 613 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 OR1D2P34982 312 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 LTBRP36941 435 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 CLCN4P51793 760 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 YWHAHQ04917 246 aaPredicted RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 KCNC3Q14003 757 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 TDRD10Q5VZ19 366 aaKnown RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 SASS6Q6UVJ0 657 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 TMEM184AQ6ZMB5 413 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 SYAP1Q96A49 352 aaPredicted RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 SRRTQ9BXP5 876 aaKnown RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 GDAP2Q9NXN4 497 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 ARMCX3Q9UH62 379 aaPredicted RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 DACH1Q9UI36 760 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 DSEQ9UL01 958 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 CDY1Q9Y6F8 540 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 XIRP2A4UGR9 3374 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 ANK1P16157 1881 aa13.27□□□□□ -0.29
USP1-203ENST00000442679 PDCD11Q14690 1871 aaKnown RBP13.27□□□□□ -0.29
USP1-203ENST00000442679 H3BQ06 376 aaPredicted RBP13.26□□□□□ -0.29
USP1-203ENST00000442679 ADAM12O43184 909 aa13.26□□□□□ -0.29
USP1-203ENST00000442679 TBC1D4O60343 1298 aa13.26□□□□□ -0.29
USP1-203ENST00000442679 STX10O60499 249 aa13.26□□□□□ -0.29
USP1-203ENST00000442679 HUS1O60921 280 aa13.26□□□□□ -0.29
USP1-203ENST00000442679 OAZ2O95190 189 aa13.26□□□□□ -0.29
USP1-203ENST00000442679 FGFR1OPO95684 399 aaKnown RBP13.26□□□□□ -0.29
USP1-203ENST00000442679 SPATA31D3P0C874 917 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms