RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 YIPF1Q9Y548 306 aa15.32■□□□□ 0.04
LINC00642-202ENST00000442515 SMIM28A0A1B0GU29 152 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 LNP1A1A4G5 178 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 EVCP57679 992 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 TNK2Q07912 1038 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 ZNF280DQ6N043 979 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 PIK3AP1Q6ZUJ8 805 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 ARID3BQ8IVW6 561 aaPredicted RBP15.31■□□□□ 0.04
LINC00642-202ENST00000442515 MCPH1Q8NEM0 835 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 COL26A1Q96A83 441 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
LINC00642-202ENST00000442515 SLC8A2Q9UPR5 921 aa15.31■□□□□ 0.04
LINC00642-202ENST00000442515 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
LINC00642-202ENST00000442515 CREB5Q02930 508 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 ARHGAP29Q52LW3 1261 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 HAUS6Q7Z4H7 955 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 KCNB2Q92953 911 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 MKNK1Q9BUB5 465 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 LRRC3Q9BY71 257 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 DUSP15Q9H1R2 295 aaPredicted RBP15.3■□□□□ 0.04
LINC00642-202ENST00000442515 MAFFQ9ULX9 164 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 SNX14Q9Y5W7 946 aa15.3■□□□□ 0.04
LINC00642-202ENST00000442515 DPYSL4O14531 572 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 CPLX1O14810 134 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 CAVIN2O95810 425 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 CEACAM1P13688 526 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 CPB1P15086 417 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 ELF2Q15723 593 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 EARS2Q5JPH6 523 aaKnown RBP15.29■□□□□ 0.04
LINC00642-202ENST00000442515 RNF19BQ6ZMZ0 732 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 CEP120Q8N960 986 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 OXER1Q8TDS5 423 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 HHIPQ96QV1 700 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 TMEM209Q96SK2 561 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 KIFC3Q9BVG8 833 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 POLR3BQ9NW08 1133 aaPredicted RBP15.29■□□□□ 0.04
LINC00642-202ENST00000442515 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
LINC00642-202ENST00000442515 TAF4O00268 1085 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 DCLK1O15075 740 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 ATG13O75143 517 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 ATP2B1P20020 1258 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 CSRP1P21291 193 aaKnown RBP15.28■□□□□ 0.04
LINC00642-202ENST00000442515 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
LINC00642-202ENST00000442515 XKR4Q5GH76 650 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 ATF7IP2Q5U623 682 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 KIAA1211LQ6NV74 962 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 DEPTORQ8TB45 409 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 ZMAT2Q96NC0 199 aaKnown RBP15.28■□□□□ 0.04
LINC00642-202ENST00000442515 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 PCDHA12Q9UN75 941 aa15.28■□□□□ 0.04
LINC00642-202ENST00000442515 ITPR1Q14643 2758 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.04
LINC00642-202ENST00000442515 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 VNN2O95498 520 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 PRAMEF12O95522 483 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 NAMPTP43490 491 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 YARSP54577 528 aaKnown RBP15.27■□□□□ 0.04
LINC00642-202ENST00000442515 PLCB2Q00722 1185 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 PLD1Q13393 1074 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 ITPRIPL2Q3MIP1 535 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 TMEM196Q5HYL7 178 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 NT5DC1Q5TFE4 455 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 FSTL4Q6MZW2 842 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 ALKAL1Q6UXT8 129 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 CAMKK1Q8N5S9 505 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 APPL2Q8NEU8 664 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 BEST2Q8NFU1 509 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 BPIFB1Q8TDL5 484 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 DDX12PQ92771 950 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 PGLYRP2Q96PD5 576 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 CRISPLD1Q9H336 500 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 TMEM9BQ9NQ34 198 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
LINC00642-202ENST00000442515 OBP2AQ9NY56 170 aa15.27■□□□□ 0.04
LINC00642-202ENST00000442515 HYAL3O43820 417 aaPredicted RBP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 RNF40O75150 1001 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 RHOBTB1O94844 696 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 MCM4P33991 863 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 HSPA4P34932 840 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 GRM5P41594 1212 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 OSTNP61366 133 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 GRSF1Q12849 480 aaKnown RBP eCLIP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 CALCRLQ16602 461 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 GPR158Q5T848 1215 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 GAREM2Q75VX8 874 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 DEFB124Q8NES8 71 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 CHFRQ96EP1 664 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 CCDC94Q9BW85 323 aaPredicted RBP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 CDT1Q9H211 546 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 ATXN3LQ9H3M9 355 aa15.26■□□□□ 0.03
LINC00642-202ENST00000442515 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
LINC00642-202ENST00000442515 GJB4Q9NTQ9 266 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms