RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 GABRB3P28472 473 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 CARSP49589 748 aaKnown RBP4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 LRP8Q14114 963 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 FAM110CQ1W6H9 321 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 ARTNQ5T4W7 220 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 TANGO2Q6ICL3 276 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 BORAQ6PGQ7 559 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 CXXC5Q7LFL8 322 aaKnown RBP4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 CPOQ8IVL8 374 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 OR56A3Q8NH54 315 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 UIMC1Q96RL1 719 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 TMEM209Q96SK2 561 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 NELL2Q99435 816 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 ZNF518BQ9C0D4 1074 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 DHX36Q9H2U1 1008 aaKnown RBP4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 RIC8AQ9NPQ8 531 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 WASH6PQ9NQA3 447 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 GPRC5DQ9NZD1 345 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 Q9UFV3 132 aa4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 YBX2Q9Y2T7 364 aaKnown RBP4.71□□□□□ -1.65
CDC42BPA-207ENST00000441725 ITIH6Q6UXX5 1313 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 CC2D2AQ9P2K1 1620 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 A0A0B4J269 797 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 A6NLC8 198 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 FIBPO43427 364 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 ASNA1O43681 348 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 BAIAP3O94812 1187 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 RRM1P23921 792 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 MC3RP41968 323 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 LIFRP42702 1097 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 NOMO3P69849 1222 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZNF200P98182 395 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 C1QTNF12Q5T7M4 302 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 DPP8Q6V1X1 898 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 VGLL2Q8N8G2 317 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 HDAC2Q92769 488 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 PYM1Q9BRP8 204 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 KATNAL1Q9BW62 490 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 STK31Q9BXU1 1019 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 EIF2AQ9BY44 585 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 NECTIN3Q9NQS3 549 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 SIDT1Q9NXL6 827 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 ING3Q9NXR8 418 aa4.71□□□□□ -1.66
CDC42BPA-207ENST00000441725 ALDH1A2O94788 518 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 RAC2P15153 192 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ELF1P32519 619 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 CRHR1P34998 444 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 KRT9P35527 623 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ALDH1A3P47895 512 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 RAB32Q13637 225 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 PDE1CQ14123 709 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 NFXL1Q6ZNB6 911 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 USP49Q70CQ1 688 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 MPP5Q8N3R9 675 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 OR1N1Q8NGS0 311 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 RUBCNQ92622 972 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZBTB10Q96DT7 871 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 MAGEB5Q9BZ81 275 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.7□□□□□ -1.662e-6■■■■□ 23.8
CDC42BPA-207ENST00000441725 ZFP64Q9NPA5 681 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 SPATA6Q9NWH7 488 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 RGL1Q9NZL6 768 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZNF212Q9UDV6 495 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ZDHHC8Q9ULC8 765 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 B4E171 279 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 GRM6O15303 877 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 HOXC11O43248 304 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 KLHL18O94889 574 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ITGA5P08648 1049 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 PTPN7P35236 360 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 TSPAN7P41732 249 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ITGA1P56199 1179 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 HABP2Q14520 560 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 SURF1Q15526 300 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 SLC44A4Q53GD3 710 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 PRAMEF14Q5SWL7 426 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 PLXDC1Q8IUK5 500 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 PCYOX1LQ8NBM8 494 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 OTUD7AQ8TE49 926 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 CASKIN2Q8WXE0 1202 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 HERVK_113Q902F9 699 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 MYOCQ99972 504 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 CENPOQ9BU64 300 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 C11orf54Q9H0W9 315 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 RSPH9Q9H1X1 276 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 MLXIPQ9HAP2 919 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 ASAP1Q9ULH1 1129 aa4.7□□□□□ -1.66
CDC42BPA-207ENST00000441725 SOAT2O75908 522 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 TBX18O95935 607 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 PRNPP04156 253 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 GYS1P13807 737 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 WNT3AP56704 352 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 CACNB2Q08289 660 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 DCAF12L1Q5VU92 463 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 C2CD5Q86YS7 1000 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 HERC6Q8IVU3 1022 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 SLC15A4Q8N697 577 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 SPPL3Q8TCT6 385 aa4.69□□□□□ -1.66
CDC42BPA-207ENST00000441725 MAELQ96JY0 434 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms