RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SCARA5Q6ZMJ2 495 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CDR2LQ86X02 465 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 EFCAB13Q8IY85 973 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CCDC26Q8TAB7 109 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 HPDLQ96IR7 371 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 MMS19Q96T76 1030 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 RHOXF2Q9BQY4 288 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CARD9Q9H257 536 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 WDR35Q9P2L0 1181 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 PTPRJQ12913 1337 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SRGAP2O75044 1071 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 NFICP08651 508 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ACO1P21399 889 aaKnown RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 MAP2K2P36507 400 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CENPCQ03188 943 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 PRKCZQ05513 592 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 PHF13Q86YI8 300 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 MCOLN2Q8IZK6 566 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 LRRC52Q8N7C0 313 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CEP120Q8N960 986 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 LRRC57Q8N9N7 239 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SPATA4Q8NEY3 305 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ACTRT1Q8TDG2 376 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 PCDHB18PQ96TA0 734 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS50-205ENST00000441602 CFHR5Q9BXR6 569 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 PARD6BQ9BYG5 372 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SEZ6LQ9BYH1 1024 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SYNCQ9H7C4 482 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CHST12Q9NRB3 414 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SLC38A7Q9NVC3 462 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SRRDQ9UH36 339 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SALL4Q9UJQ4 1053 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 KAT6AQ92794 2004 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 TTLL13PA6NNM8 815 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 GPR182O15218 404 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 GPR32O75388 356 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 RPS6KA5O75582 802 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 MYCNP04198 464 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 CYP1A1P04798 512 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 VDRP11473 427 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SKIP12755 728 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 H2AFXP16104 143 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 CST5P28325 142 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 RAB27AP51159 221 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 NKX3-2P78367 333 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 TMEM62Q0P6H9 643 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SLC10A6Q3KNW5 377 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 WDR72Q3MJ13 1102 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 TWF2Q6IBS0 349 aaKnown RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 DNAJC24Q6P3W2 148 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 NT5DC3Q86UY8 548 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ERICH1Q86X53 443 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 IFT20Q8IY31 132 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 TRIB2Q92519 343 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ARHGEF26Q96DR7 871 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ZBTB10Q96DT7 871 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SNX27Q96L92 541 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 GTF2IRD1Q9UHL9 959 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 RASAL2Q9UJF2 1139 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ARHGEF37A1IGU5 675 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 TREHO43280 583 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CAND2O75155 1236 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CAPN15O75808 1086 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PRKAR2AP13861 404 aaKnown RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 CTNNA2P26232 953 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ZNF132P52740 706 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 NBPF20Q3BBV1 942 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SGO2Q562F6 1265 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 RUFY4Q6ZNE9 571 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 FAM43BQ6ZT52 329 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 MAATS1Q7Z4T9 603 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CREG2Q8IUH2 290 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 GOLGA6L1Q8N7Z2 621 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 C1orf127Q8N9H9 656 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 DDX1Q92499 740 aaKnown RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 LENG1Q96BZ8 264 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 PSMB7Q99436 277 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 C11orf70Q9BRQ4 267 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 APOL6Q9BWW8 343 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PARVAQ9NVD7 372 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 TAS2R14Q9NYV8 317 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ANAPC7Q9UJX3 599 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PCDHGC3Q9UN70 934 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 GABRQQ9UN88 632 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ZSWIM8A7E2V4 1837 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 KRIT1O00522 736 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ADCY6O43306 1168 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CSDE1O75534 798 aaKnown RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 SETSIPP0DME0 302 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CYP3A5P20815 502 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PAX3P23760 479 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 APLP1P51693 650 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 WNT7BP56706 349 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 RWDD2BP57060 319 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 NOMO3P69849 1222 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ADAM17P78536 824 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 C2orf54Q08AI8 447 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms