RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SPP2Q13103 211 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 NR1H3Q13133 447 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 DNAJC3Q13217 504 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 PRR16Q569H4 304 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 CPXCR1Q8N123 301 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 C10orf82Q8WW14 230 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 SCG3Q8WXD2 468 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 PAIP2Q9BPZ3 127 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 INTS2Q9H0H0 1204 aaKnown RBP12.62□□□□□ -0.39
LTBR-203ENST00000441074 UBN1Q9NPG3 1134 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 HOMER2Q9NSB8 354 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 APEX2Q9UBZ4 518 aa12.62□□□□□ -0.39
LTBR-203ENST00000441074 RASA4BC9J798 803 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 FSCN2O14926 492 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 RASA4O43374 803 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 CHRNB2P17787 502 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 CIITAP33076 1130 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 SREBF1P36956 1147 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 ITGA8P53708 1063 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 MAP3K10Q02779 954 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 TNFAIP1Q13829 316 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 PTK6Q13882 451 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 SPARCL1Q14515 664 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 MAML1Q92585 1016 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 GATA6Q92908 595 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
LTBR-203ENST00000441074 PDP2Q9P2J9 529 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 WDR90Q96KV7 1748 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
LTBR-203ENST00000441074 A0A1B0GVG6 124 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 FAM86B1E9PN63 330 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 TGFB1I1O43294 461 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 SORBS3O60504 671 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 TJP3O95049 919 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 FAM86B2P0C5J1 330 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 ADCY1Q08828 1119 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 PDK4Q16654 411 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 LRRC23Q53EV4 343 aaPredicted RBP12.61□□□□□ -0.39
LTBR-203ENST00000441074 TAF1BQ53T94 588 aaPredicted RBP12.61□□□□□ -0.39
LTBR-203ENST00000441074 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
LTBR-203ENST00000441074 MAIP1Q8WWC4 291 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 TRAIPQ9BWF2 469 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 RABGAP1Q9Y3P9 1069 aa12.61□□□□□ -0.39
LTBR-203ENST00000441074 FAM170AA1A519 330 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 FOXN3O00409 490 aaPredicted RBP12.6□□□□□ -0.39
LTBR-203ENST00000441074 PRPF4O43172 522 aaKnown RBP eCLIP12.6□□□□□ -0.39
LTBR-203ENST00000441074 PEX10O60683 326 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 MAN1A1P33908 653 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 PSMC4P43686 418 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SESN3P58005 492 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 PSMC6P62333 389 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 CDR2Q01850 454 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SLC34A1Q06495 639 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 ARHGAP44Q17R89 818 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
LTBR-203ENST00000441074 RELL1Q8IUW5 271 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 NRG4Q8WWG1 115 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 LENG9Q96B70 501 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SLCO1B3Q9NPD5 702 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SCN4AP35499 1836 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 MEIS1O00470 390 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 C2CD2LO14523 706 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SPOPO43791 374 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 RCN1Q15293 331 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SGO2Q562F6 1265 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 RFWD3Q6PCD5 774 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 TRABD2AQ86V40 505 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 ATL2Q8NHH9 583 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SLC20A1Q8WUM9 679 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 AZIN2Q96A70 460 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 GBP5Q96PP8 586 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 MIPEPQ99797 713 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 TUBB6Q9BUF5 446 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 CADM1Q9BY67 442 aaKnown RBP12.6□□□□□ -0.39
LTBR-203ENST00000441074 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 BHMT2Q9H2M3 363 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 CYLDQ9NQC7 956 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
LTBR-203ENST00000441074 VAV3Q9UKW4 847 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
LTBR-203ENST00000441074 SMCHD1A6NHR9 2005 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms