RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 PPM1EQ8WY54 764 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 EPN3Q9H201 632 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 RANBP17Q9H2T7 1088 aaKnown RBP6.87□□□□□ -1.31
CHD6-204ENST00000440647 ZCCHC4Q9H5U6 513 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 IL23AQ9NPF7 189 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 IL17RBQ9NRM6 502 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 ANAPC4Q9UJX5 808 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 PNMA2Q9UL42 364 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 Q9Y3F1 56 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 RWDD3Q9Y3V2 267 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 PCDHA5Q9Y5H7 936 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 LAMA4Q16363 1823 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 COL6A3P12111 3177 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 MYH6P13533 1939 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 TANC1Q9C0D5 1861 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 ASTN1O14525 1302 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 ZC3H12DA2A288 527 aaKnown RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 GRXCR1A8MXD5 290 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 B4DLN1 442 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CTAGE5O15320 804 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 KLF4O43474 513 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 B4GALT4O60513 344 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CD4P01730 458 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 FGBP02675 491 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 MYL3P08590 195 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 SUPT20HL2P0C7V6 817 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CALML3P27482 149 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 ALDH5A1P51649 535 aaPredicted RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 MRPL12P52815 198 aaKnown RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 PDE1AP54750 535 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CCL23P55773 120 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 RRP1P56182 461 aaKnown RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 PSMC6P62333 389 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 NKX3-2P78367 333 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CYP4F3Q08477 520 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 BAATQ14032 418 aaPredicted RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 DUSP28Q4G0W2 176 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 MCMDC2Q4G0Z9 681 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 C4orf46Q504U0 113 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 FAM47CQ5HY64 1035 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 IQCEQ6IPM2 695 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 TSHZ1Q6ZSZ6 1077 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 OTOP2Q7RTS6 562 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CABP7Q86V35 215 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 IGDCC3Q8IVU1 814 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 OR6J1Q8NGC5 347 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 FRS2Q8WU20 508 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 CCDC140Q96MF4 163 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 TMEM47Q9BQJ4 181 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 WDR11Q9BZH6 1224 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 RNF41Q9H4P4 317 aaPredicted RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 SLC28A3Q9HAS3 691 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 PARD6AQ9NPB6 346 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 PDGFCQ9NRA1 345 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 ST7Q9NRC1 585 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD6-204ENST00000440647 GULP1Q9UBP9 304 aa6.86□□□□□ -1.31
CHD6-204ENST00000440647 DDX49Q9Y6V7 483 aaKnown RBP6.86□□□□□ -1.31
CHD6-204ENST00000440647 ZMYM6O95789 1325 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 UMODL1Q5DID0 1318 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 SALL3Q9BXA9 1300 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 A0A0D9SFI3 127 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 NKRFO15226 690 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHD6-204ENST00000440647 FOXP2O15409 715 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 TBX1O43435 398 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 FGAP02671 866 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 PTMAP06454 111 aaKnown RBP6.85□□□□□ -1.31
CHD6-204ENST00000440647 PFKMP08237 780 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 HSPD1P10809 573 aaKnown RBP6.85□□□□□ -1.31
CHD6-204ENST00000440647 PDHBP11177 359 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 PCP11498 1178 aaKnown RBP6.85□□□□□ -1.31
CHD6-204ENST00000440647 PI3P19957 117 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 PTGS1P23219 599 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 HAND2P61296 217 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 PRR5P85299 388 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 PPP2R5BQ15173 497 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 ALX1Q15699 326 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 TAPT1Q6NXT6 567 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 BTNL9Q6UXG8 535 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 SLC30A10Q6XR72 485 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 RNF207Q6ZRF8 634 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 MFSD6Q6ZSS7 791 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 FAM43BQ6ZT52 329 aaPredicted RBP6.85□□□□□ -1.31
CHD6-204ENST00000440647 C16orf59Q7L2K0 433 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 CELF2-AS1Q8N7Q2 184 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 NETO2Q8NC67 525 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 USP33Q8TEY7 942 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 HERVK_113Q902F9 699 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 ESR2Q92731 530 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 FAM227BQ96M60 508 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 MTG1Q9BT17 334 aaPredicted RBP6.85□□□□□ -1.31
CHD6-204ENST00000440647 TRPV6Q9H1D0 765 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 PRDM12Q9H4Q4 367 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 TCP11L1Q9NUJ3 509 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 DBR1Q9UK59 544 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms