RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CACTINQ8WUQ7 758 aaKnown RBP19.48■□□□□ 0.71
CPSF4-205ENST00000440514 ANKRD36BP1Q96IX9 119 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 SENP8Q96LD8 212 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 MFSD14AQ96MC6 490 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 FNBP1Q96RU3 617 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 POP1Q99575 1024 aaKnown RBP19.48■□□□□ 0.71
CPSF4-205ENST00000440514 GTPBP4Q9BZE4 634 aaKnown RBP19.48■□□□□ 0.71
CPSF4-205ENST00000440514 MAN1C1Q9NR34 630 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 DZANK1Q9NVP4 752 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 SIX4Q9UIU6 781 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 CDH22Q9UJ99 828 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 ITGA11Q9UKX5 1188 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 AGAP1Q9UPQ3 857 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 CDY1Q9Y6F8 540 aa19.48■□□□□ 0.71
CPSF4-205ENST00000440514 TCF20Q9UGU0 1960 aaKnown RBP19.48■□□□□ 0.71
CPSF4-205ENST00000440514 TGM5O43548 720 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 TNNC2P02585 160 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 KRT19P08727 400 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 OR1D2P34982 312 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 COBLL1Q53SF7 1204 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 TMEM174Q8WUU8 243 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 ZNF560Q96MR9 790 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 USP15Q9Y4E8 981 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-205ENST00000440514 BACE2Q9Y5Z0 518 aa19.47■□□□□ 0.71
CPSF4-205ENST00000440514 SPDYE4A6NLX3 237 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 GOLGA6L22H0YM25 854 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 CD44P16070 742 aaKnown RBP19.46■□□□□ 0.71
CPSF4-205ENST00000440514 TNNI1P19237 187 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 BMP6P22004 513 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 BFSP1Q12934 665 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 MORC3Q14149 939 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 NFIL3Q16649 462 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 RARS2Q5T160 578 aaKnown RBP19.46■□□□□ 0.71
CPSF4-205ENST00000440514 ADSSL1Q8N142 457 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 CSGALNACT2Q8N6G5 542 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 APPL2Q8NEU8 664 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 S1PR5Q9H228 398 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 CLSTN2Q9H4D0 955 aa19.46■□□□□ 0.71
CPSF4-205ENST00000440514 TRIM49BA6NDI0 452 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 LRRIQ3A6PVS8 624 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-205ENST00000440514 WEE2P0C1S8 567 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 ODC1P11926 461 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 PMS1P54277 932 aaKnown RBP19.45■□□□□ 0.7
CPSF4-205ENST00000440514 YWHAHQ04917 246 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-205ENST00000440514 MRPL58Q14197 206 aaKnown RBP19.45■□□□□ 0.7
CPSF4-205ENST00000440514 MYBPC2Q14324 1141 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 DUOXA2Q1HG44 320 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 EDRF1Q3B7T1 1238 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 PUS10Q3MIT2 529 aaKnown RBP19.45■□□□□ 0.7
CPSF4-205ENST00000440514 SV2CQ496J9 727 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 CTXN3Q4LDR2 81 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 ZNF280DQ6N043 979 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 LILRA6Q6PI73 481 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 ADAMTS19Q8TE59 1207 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 EEF2KMTQ96G04 330 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 NECAB3Q96P71 396 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-205ENST00000440514 SFXN1Q9H9B4 322 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 FBXL5Q9UKA1 691 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 FBXW11Q9UKB1 542 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 FRMD4BQ9Y2L6 1034 aa19.45■□□□□ 0.7
CPSF4-205ENST00000440514 KPNA7A9QM74 516 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 H7C4K7 107 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 TBC1D4O60343 1298 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 AKAP3O75969 853 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 HOXB8P17481 243 aaPredicted RBP19.44■□□□□ 0.7
CPSF4-205ENST00000440514 TYMPP19971 482 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 PNPLA4P41247 253 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 ARPP19P56211 112 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 DLG4P78352 724 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 ROR1Q01973 937 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 RAB33AQ14088 237 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 OVOS1Q6IE37 1185 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 SLC8B1Q6J4K2 584 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 TMC5Q6UXY8 1006 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 TRAPPC11Q7Z392 1133 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 LRRC52Q8N7C0 313 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 KREMEN2Q8NCW0 462 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 PARD3BQ8TEW8 1205 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 ZNF516Q92618 1163 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 BORCS6Q96GS4 357 aa19.44■□□□□ 0.7
CPSF4-205ENST00000440514 MTCL1Q9Y4B5 1905 aaKnown RBP19.43■□□□□ 0.7
CPSF4-205ENST00000440514 C2orf16Q68DN1 1984 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 WDR27A2RRH5 827 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 CYB561D2O14569 222 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 PSMA7O14818 248 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 RFPL2O75678 378 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 PAX3P23760 479 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
CPSF4-205ENST00000440514 RBP5P82980 135 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 ADAM9Q13443 819 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 STIM1Q13586 685 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 SMAD2Q15796 467 aaKnown RBP19.43■□□□□ 0.7
CPSF4-205ENST00000440514 CENPPQ6IPU0 288 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 KLHL10Q6JEL2 608 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 USP37Q86T82 979 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 FAM186BQ8IYM0 893 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 TSG101Q99816 390 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 KIAA1468Q9P260 1216 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 CTNND2Q9UQB3 1225 aa19.43■□□□□ 0.7
CPSF4-205ENST00000440514 PPP1R3GB7ZBB8 358 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms