RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ZNF75CPQ92670 426 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ZNF333Q96JL9 665 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 C10orf88Q9H8K7 445 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ZWILCHQ9H900 591 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 TCEAL9Q9UHQ7 104 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 PSMG1O95456 288 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ACADSP16219 412 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 CCNFP41002 786 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 BFSP1Q12934 665 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 BBS9Q3SYG4 887 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ZNF804AQ7Z570 1209 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 WDR75Q8IWA0 830 aaKnown RBP12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ARHGAP18Q8N392 663 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 WDR60Q8WVS4 1066 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ESYT2A0FGR8 921 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ZFXP17010 805 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ARSEP51690 589 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 TTC7BQ86TV6 843 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 PALM2Q8IXS6 379 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 CCDC89Q8N998 374 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 PRR11Q96HE9 360 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-209ENST00000439886 NSL1Q96IY1 281 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 PI4K2AQ9BTU6 479 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 GINM1Q9NU53 330 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 WHRNQ9P202 907 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 ANKFY1Q9P2R3 1169 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 CHMP2BQ9UQN3 213 aa12.35□□□□□ -0.43
SMPD4-209ENST00000439886 EML1O00423 815 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 GGPS1O95749 300 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 T-ENOLP0DO92 83 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 ANXA13P27216 316 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 ZNF543Q08ER8 600 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 ORC2Q13416 577 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 ITPK1Q13572 414 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 CCDC174Q6PII3 467 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 PPP1R14CQ8TAE6 165 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 EDF1O60869 148 aaKnown RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 WFS1O76024 890 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 TJP3O95049 919 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 MYCLP1P12525 358 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 SERPINB6P35237 376 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 PSMC4P43686 418 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 CACNB3P54284 484 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 BTKQ06187 659 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 NFIXQ14938 502 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 SMAD1Q15797 465 aaKnown RBP12.34□□□□□ -0.43
SMPD4-209ENST00000439886 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 CLNKQ7Z7G1 428 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 RASSF3Q86WH2 238 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 INPP5DQ92835 1189 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 FNBP1Q96RU3 617 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
SMPD4-209ENST00000439886 UBAP1LF5GYI3 381 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 TMCC1O94876 653 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 AMPD1P23109 780 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 RPA1P27694 616 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 SKIV2L2P42285 1042 aaKnown RBP12.33□□□□□ -0.43
SMPD4-209ENST00000439886 VAMP7P51809 220 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 YARSP54577 528 aaKnown RBP12.33□□□□□ -0.43
SMPD4-209ENST00000439886 BPIFB4P59827 614 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 GTF2IP78347 998 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 CEP70Q8NHQ1 597 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 HIC2Q96JB3 615 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 TSSK1BQ9BXA7 367 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 NDE1Q9NXR1 346 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.43
SMPD4-209ENST00000439886 GAS7O60861 476 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 SSTR1P30872 391 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 ALDH18A1P54886 795 aaKnown RBP12.33□□□□□ -0.44
SMPD4-209ENST00000439886 LBRQ14739 615 aaKnown RBP12.33□□□□□ -0.44
SMPD4-209ENST00000439886 EFTUD2Q15029 972 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■■■ 38.4
SMPD4-209ENST00000439886 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-209ENST00000439886 ARHGAP24Q8N264 748 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 ZMAT2Q96NC0 199 aaKnown RBP12.33□□□□□ -0.44
SMPD4-209ENST00000439886 MIPEPQ99797 713 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 CBWD1Q9BRT8 395 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 SYNCQ9H7C4 482 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 ATXN10Q9UBB4 475 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF711Q9Y462 761 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 MAPK6Q16659 721 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 C11orf63Q6NUN7 778 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms