RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 DCAF4L1Q3SXM0 396 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 ZNF667Q5HYK9 610 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 PRAMEF19Q5SWL8 479 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 JADE1Q6IE81 842 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 KAT2BQ92831 832 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 APBA2Q99767 749 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 BCO2Q9BYV7 579 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 ADAMTS10Q9H324 1103 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 VRTNQ9H8Y1 702 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 EPB41L5Q9HCM4 733 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SIX4Q9UIU6 781 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 ANAPC7Q9UJX3 599 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 GOLGA6L10A0A0M3HER8 536 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 HAS3O00219 553 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 CFHP08603 1231 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 ITGA4P13612 1032 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 CDH5P33151 784 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-202ENST00000439724 GRM5P41594 1212 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMAD3-202ENST00000439724 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 ZNF211Q13398 564 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-202ENST00000439724 MFSD10Q14728 455 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 SEL1L2Q5TEA6 688 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 PLEKHA7Q6IQ23 1121 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-202ENST00000439724 CD302Q8IX05 232 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 CCDC26Q8TAB7 109 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 CASKIN2Q8WXE0 1202 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 BTBD6Q96KE9 485 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 C11orf70Q9BRQ4 267 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
SMAD3-202ENST00000439724 ZFYVE28Q9HCC9 887 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 ST7Q9NRC1 585 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 ADAM22Q9P0K1 906 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 GJD2Q9UKL4 321 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 C2CD2Q9Y426 696 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
SMAD3-202ENST00000439724 GPR32O75388 356 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 STAU1O95793 577 aaKnown RBP12.54□□□□□ -0.4
SMAD3-202ENST00000439724 CD58P19256 250 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 CYP2C19P33261 490 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 PSEN2P49810 448 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 CPT1AP50416 773 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 RWDD2BP57060 319 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 ADAM17P78536 824 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 CUL1Q13616 776 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 TMEM132DQ14C87 1099 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 CCL14Q16627 93 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 SND1Q7KZF4 910 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMAD3-202ENST00000439724 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 PASD1Q8IV76 773 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 ACAP3Q96P50 834 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-202ENST00000439724 ZNF518BQ9C0D4 1074 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 FAM124BQ9H5Z6 455 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-202ENST00000439724 MRPL47Q9HD33 250 aaKnown RBP12.54□□□□□ -0.4
SMAD3-202ENST00000439724 MED4Q9NPJ6 270 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMAD3-202ENST00000439724 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 UTRNP46939 3433 aa12.54□□□□□ -0.4
SMAD3-202ENST00000439724 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 ZSCAN5CA6NGD5 496 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-202ENST00000439724 H3BQF6 201 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 MYO1FO00160 1098 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 PROSCO94903 275 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 ITGB3P05106 788 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 CALB1P05937 261 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 KRT19P08727 400 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 PAEPP09466 180 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 CYP2C9P11712 490 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 CYP2B6P20813 491 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 MMP8P22894 467 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 BRD2P25440 801 aaKnown RBP12.53□□□□□ -0.4
SMAD3-202ENST00000439724 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
SMAD3-202ENST00000439724 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 SCARA5Q6ZMJ2 495 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 MMS22LQ6ZRQ5 1243 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 HINFPQ9BQA5 517 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 FAM49AQ9H0Q0 323 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-202ENST00000439724 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 CYP3A43Q9HB55 503 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
SMAD3-202ENST00000439724 ESYT3A0FGR9 886 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.4
SMAD3-202ENST00000439724 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms