RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 C7orf31Q8N865 590 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 RNF149Q8NC42 400 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PARD3BQ8TEW8 1205 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PIK3R5Q8WYR1 880 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 JAKMIP2Q96AA8 810 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ERO1AQ96HE7 468 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 PPP1R13BQ96KQ4 1090 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 SPAG5Q96R06 1193 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FNBP1Q96RU3 617 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 EIF3CQ99613 913 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 ACO2Q99798 780 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 CBWD1Q9BRT8 395 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FAM213AQ9BRX8 229 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 CRACR2AQ9BSW2 395 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MTG1Q9BT17 334 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TCHPQ9BT92 498 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIFC3Q9BVG8 833 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TARS2Q9BW92 718 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 STK33Q9BYT3 514 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GCOM2Q9BZD3 368 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TSGA10Q9BZW7 698 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 INO80BQ9C086 356 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 INTS2Q9H0H0 1204 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 UPF3AQ9H1J1 476 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GANQ9H2C0 597 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FZD8Q9H461 694 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 DEF6Q9H4E7 631 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 NHEJ1Q9H9Q4 299 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMEM8AQ9HCN3 771 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 C11orf16Q9NQ32 467 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 AGPAT5Q9NUQ2 364 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRMT1Q9NXH9 659 aaKnown RBP4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 RNF186Q9NXI6 227 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 AIPL1Q9NZN9 384 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 GCNT4Q9P109 453 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 MYO1AQ9UBC5 1043 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 APEX2Q9UBZ4 518 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 AKT3Q9Y243 479 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 COQ4Q9Y3A0 265 aa4.29□□□□□ -1.72
HMGB1P37-201ENST00000439613 CNTNAP2Q9UHC6 1331 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CITO14578 2027 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 C17orf102A2RUQ5 167 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MBLAC1A4D2B0 266 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 GOLGA8IPA6NC78 632 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 LRRC53A6NM62 1247 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 GOLGA8JA6NMD2 632 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TISP43B9A030 160 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 HAS3O00219 553 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 ADCY6O43306 1168 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KRT86O43790 486 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIF5CO60282 957 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRPA1O75762 1119 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CABYRO75952 493 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 ERLIN2O94905 339 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 IL18RAPO95256 599 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 LCA5LO95447 670 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 HMGCRP04035 888 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CLTAP09496 248 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIM49P0CI25 452 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIM49CP0CI26 452 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SMIM10L2AP0DMW4 78 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SMIM10L2BP0DMW5 78 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 DLATP10515 647 aaKnown RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MCF2P10911 925 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYBAP13498 195 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TNNT1P13805 278 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TNNI1P19237 187 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 EIF4A3P38919 411 aaKnown RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRKCIP41743 596 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 GCLMP48507 274 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 GPC3P51654 580 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CLCN3P51790 818 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TERF1P54274 439 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MFAP3P55082 362 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 JAM2P57087 298 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 ETF1P62495 437 aaKnown RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MBTD1Q05BQ5 628 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MCL1Q07820 350 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 PPP3CAQ08209 521 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KLHL30Q0D2K2 578 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 DRP2Q13474 957 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TUBB2AQ13885 445 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 RAPGEF1Q13905 1077 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 EPC2Q52LR7 807 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 ARHGAP29Q52LW3 1261 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 C1orf220Q5T0J3 134 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MARCH8Q5T0T0 291 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMCO4Q5TGY1 634 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 ATF7IP2Q5U623 682 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 IQCEQ6IPM2 695 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 DPY19L2P1Q6NXN4 242 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 NFRKBQ6P4R8 1299 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MPZL3Q6UWV2 235 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 RAD9BQ6WBX8 426 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIAA1328Q86T90 577 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 RSPH3Q86UC2 560 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms