RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
APP-208ENST00000439274 CCDC89Q8N998 374 aa16.32■□□□□ 0.2
APP-208ENST00000439274 ANKLE1Q8NAG6 615 aa16.32■□□□□ 0.2
APP-208ENST00000439274 SUPT20HQ8NEM7 779 aa16.32■□□□□ 0.2
APP-208ENST00000439274 AGAP11Q8TF27 550 aa16.32■□□□□ 0.2
APP-208ENST00000439274 KLHL29Q96CT2 875 aa16.32■□□□□ 0.2
APP-208ENST00000439274 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
APP-208ENST00000439274 NKIRAS1Q9NYS0 192 aa16.32■□□□□ 0.2
APP-208ENST00000439274 PCDHB4Q9Y5E5 795 aa16.32■□□□□ 0.2
APP-208ENST00000439274 RASA4BC9J798 803 aa16.31■□□□□ 0.2
APP-208ENST00000439274 RASA4O43374 803 aa16.31■□□□□ 0.2
APP-208ENST00000439274 PSTPIP1O43586 416 aa16.31■□□□□ 0.2
APP-208ENST00000439274 ZC3H11AO75152 810 aaKnown RBP eCLIP16.31■□□□□ 0.2
APP-208ENST00000439274 TAC1P20366 129 aa16.31■□□□□ 0.2
APP-208ENST00000439274 GARTP22102 1010 aa16.31■□□□□ 0.2
APP-208ENST00000439274 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
APP-208ENST00000439274 MAGEA4P43358 317 aa16.31■□□□□ 0.2
APP-208ENST00000439274 NOMO3P69849 1222 aa16.31■□□□□ 0.2
APP-208ENST00000439274 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
APP-208ENST00000439274 ZNF268Q14587 947 aaPredicted RBP16.31■□□□□ 0.2
APP-208ENST00000439274 FASTKD3Q14CZ7 662 aaKnown RBP16.31■□□□□ 0.2
APP-208ENST00000439274 BRDTQ58F21 947 aaPredicted RBP16.31■□□□□ 0.2
APP-208ENST00000439274 ZBTB41Q5SVQ8 909 aa16.31■□□□□ 0.2
APP-208ENST00000439274 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
APP-208ENST00000439274 MAGEB18Q96M61 343 aa16.31■□□□□ 0.2
APP-208ENST00000439274 FNBP1Q96RU3 617 aa16.31■□□□□ 0.2
APP-208ENST00000439274 ADAM33Q9BZ11 813 aa16.31■□□□□ 0.2
APP-208ENST00000439274 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
APP-208ENST00000439274 SAYSD1Q9NPB0 183 aa16.31■□□□□ 0.2
APP-208ENST00000439274 EURLQ9NYK6 297 aa16.31■□□□□ 0.2
APP-208ENST00000439274 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
APP-208ENST00000439274 C4BPAP04003 597 aaKnown RBP16.3■□□□□ 0.2
APP-208ENST00000439274 GNA15P30679 374 aa16.3■□□□□ 0.2
APP-208ENST00000439274 LIG4P49917 911 aa16.3■□□□□ 0.2
APP-208ENST00000439274 WDR4P57081 412 aaKnown RBP16.3■□□□□ 0.2
APP-208ENST00000439274 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
APP-208ENST00000439274 ZACNQ401N2 412 aa16.3■□□□□ 0.2
APP-208ENST00000439274 ZFYVE27Q5T4F4 411 aa16.3■□□□□ 0.2
APP-208ENST00000439274 LIN9Q5TKA1 542 aa16.3■□□□□ 0.2
APP-208ENST00000439274 ARHGEF18Q6ZSZ5 1173 aa16.3■□□□□ 0.2
APP-208ENST00000439274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.3■□□□□ 0.2
APP-208ENST00000439274 ZNF677Q86XU0 584 aa16.3■□□□□ 0.2
APP-208ENST00000439274 KATNAL2Q8IYT4 538 aa16.3■□□□□ 0.2
APP-208ENST00000439274 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.3■□□□□ 0.2
APP-208ENST00000439274 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
APP-208ENST00000439274 ACSF2Q96CM8 615 aaPredicted RBP16.3■□□□□ 0.2
APP-208ENST00000439274 ZBTB45Q96K62 511 aaPredicted RBP16.3■□□□□ 0.2
APP-208ENST00000439274 HAPLN2Q9GZV7 340 aa16.3■□□□□ 0.2
APP-208ENST00000439274 KIF9Q9HAQ2 790 aa16.3■□□□□ 0.2
APP-208ENST00000439274 DNPEPQ9ULA0 475 aa16.3■□□□□ 0.2
APP-208ENST00000439274 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
APP-208ENST00000439274 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
APP-208ENST00000439274 EXTL3O43909 919 aa16.3■□□□□ 0.2
APP-208ENST00000439274 GCAP28676 217 aa16.3■□□□□ 0.2
APP-208ENST00000439274 RPL7AP62424 266 aaKnown RBP16.3■□□□□ 0.2
APP-208ENST00000439274 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
APP-208ENST00000439274 RIPK1Q13546 671 aa16.3■□□□□ 0.2
APP-208ENST00000439274 ECHDC2Q86YB7 292 aa16.3■□□□□ 0.2
APP-208ENST00000439274 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
APP-208ENST00000439274 KIRREL3Q8IZU9 778 aa16.3■□□□□ 0.2
APP-208ENST00000439274 MRRFQ96E11 262 aaKnown RBP16.3■□□□□ 0.2
APP-208ENST00000439274 ATP6V0A4Q9HBG4 840 aa16.3■□□□□ 0.2
APP-208ENST00000439274 RXFP1Q9HBX9 757 aa16.3■□□□□ 0.2
APP-208ENST00000439274 ATF7P17544 494 aaPredicted RBP16.29■□□□□ 0.2
APP-208ENST00000439274 CUL2Q13617 745 aa16.29■□□□□ 0.2
APP-208ENST00000439274 STAT4Q14765 748 aa16.29■□□□□ 0.2
APP-208ENST00000439274 TLDC1Q6P9B6 456 aa16.29■□□□□ 0.2
APP-208ENST00000439274 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
APP-208ENST00000439274 MAML1Q92585 1016 aa16.29■□□□□ 0.2
APP-208ENST00000439274 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
APP-208ENST00000439274 ARHGAP28Q9P2N2 729 aa16.29■□□□□ 0.2
APP-208ENST00000439274 EXOC1LA0A1B0GW35 172 aa16.29■□□□□ 0.2
APP-208ENST00000439274 POC1B-GALNT4F8VUJ3 575 aa16.29■□□□□ 0.2
APP-208ENST00000439274 BPIFB4P59827 614 aa16.29■□□□□ 0.2
APP-208ENST00000439274 PRKCEQ02156 737 aa16.29■□□□□ 0.2
APP-208ENST00000439274 STRN3Q13033 797 aa16.29■□□□□ 0.2
APP-208ENST00000439274 MTMR2Q13614 643 aa16.29■□□□□ 0.2
APP-208ENST00000439274 PSMD6Q15008 389 aa16.29■□□□□ 0.2
APP-208ENST00000439274 MTFR1Q15390 333 aa16.29■□□□□ 0.2
APP-208ENST00000439274 MTERF2Q49AM1 385 aa16.29■□□□□ 0.2
APP-208ENST00000439274 SEZ6Q53EL9 994 aa16.29■□□□□ 0.2
APP-208ENST00000439274 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
APP-208ENST00000439274 ZCCHC9Q8N567 271 aaKnown RBP16.29■□□□□ 0.2
APP-208ENST00000439274 CCDC77Q9BR77 488 aa16.29■□□□□ 0.2
APP-208ENST00000439274 PDLIM7Q9NR12 457 aa16.29■□□□□ 0.2
APP-208ENST00000439274 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
APP-208ENST00000439274 RGS20O76081 388 aa16.28■□□□□ 0.2
APP-208ENST00000439274 NR3C2P08235 984 aa16.28■□□□□ 0.2
APP-208ENST00000439274 NFX1Q12986 1120 aaKnown RBP16.28■□□□□ 0.2
APP-208ENST00000439274 PLEKHA7Q6IQ23 1121 aa16.28■□□□□ 0.2
APP-208ENST00000439274 CRELD2Q6UXH1 353 aaPredicted RBP16.28■□□□□ 0.2
APP-208ENST00000439274 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
APP-208ENST00000439274 EXD1Q8NHP7 514 aa16.28■□□□□ 0.2
APP-208ENST00000439274 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
APP-208ENST00000439274 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
APP-208ENST00000439274 IFT74Q96LB3 600 aa16.28■□□□□ 0.2
APP-208ENST00000439274 TACO1Q9BSH4 297 aaKnown RBP16.28■□□□□ 0.2
APP-208ENST00000439274 PITPNM3Q9BZ71 974 aa16.28■□□□□ 0.2
APP-208ENST00000439274 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
APP-208ENST00000439274 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms