RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 XYLT2Q9H1B5 865 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 GCNT4Q9P109 453 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 LZTS1Q9Y250 596 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 SCN1AP35498 2009 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 SYN3O14994 580 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 MYOGP15173 224 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 RFX1P22670 979 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 PBX2P40425 430 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 MYL6P60660 151 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 UBXN1Q04323 297 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 ZNF667Q5HYK9 610 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 GPR65Q8IYL9 337 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 TIFAQ96CG3 184 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 SUSD3Q96L08 255 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 ERGIC2Q96RQ1 377 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 NKX2-4Q9H2Z4 354 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 DSEQ9UL01 958 aa19.77■□□□□ 0.76
HDAC6-208ENST00000438518 A0A1W2PQC6 194 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 M0QZQ0 153 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 FGF18O76093 207 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 EFEMP2O95967 443 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 ODC1P11926 461 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 TBXAS1P24557 533 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-208ENST00000438518 TNNC1P63316 161 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 NOP14P78316 857 aaKnown RBP19.76■□□□□ 0.75
HDAC6-208ENST00000438518 NR1I3Q14994 352 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 FUT10Q6P4F1 479 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 PDXDC1Q6P996 788 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 DSTYKQ6XUX3 929 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 DDX53Q86TM3 631 aaKnown RBP19.76■□□□□ 0.75
HDAC6-208ENST00000438518 RNF168Q8IYW5 571 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-208ENST00000438518 TTC39CQ8N584 583 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 TOP6BLQ8N6T0 577 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 LMO3Q8TAP4 145 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 FAM84AQ96KN4 292 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 NT5C1BQ96P26 610 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 CACNG4Q9UBN1 327 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 PUF60Q9UHX1 559 aaKnown RBP19.76■□□□□ 0.75
HDAC6-208ENST00000438518 TSC2P49815 1807 aa19.76■□□□□ 0.75
HDAC6-208ENST00000438518 PLXNA4Q9HCM2 1894 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 NT5C1B-RDH14C9J2C7 533 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 PPEF2O14830 753 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 TYMPP19971 482 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 BMS1Q14692 1282 aaKnown RBP19.75■□□□□ 0.75
HDAC6-208ENST00000438518 WDR72Q3MJ13 1102 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 TRIM65Q6PJ69 517 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 CD300LGQ6UXG3 332 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-208ENST00000438518 ENOSF1Q7L5Y1 443 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 TMEM86AQ8N2M4 240 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 APPL2Q8NEU8 664 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 SEMA4DQ92854 862 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 JAKMIP2Q96AA8 810 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 C17orf80Q9BSJ5 609 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 NIF3L1Q9GZT8 377 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 INTS2Q9H0H0 1204 aaKnown RBP19.75■□□□□ 0.75
HDAC6-208ENST00000438518 PLCB1Q9NQ66 1216 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 PCDHB8Q9UN66 801 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 SSX2IPQ9Y2D8 614 aa19.75■□□□□ 0.75
HDAC6-208ENST00000438518 HUS1O60921 280 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 CLSTN1O94985 981 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 SOD2P04179 222 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 CYP11A1P05108 521 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 ITGB1P05556 798 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 PON1P27169 355 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 PBX3P40426 434 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 GCNT1Q02742 428 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 TIGD5Q53EQ6 642 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 TMEM173Q86WV6 379 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-208ENST00000438518 KLHL23Q8NBE8 558 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 IQCDQ96DY2 449 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 SENP8Q96LD8 212 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 HERC2P3Q9BVR0 1158 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 OXCT2Q9BYC2 517 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-208ENST00000438518 LMAN2LQ9H0V9 348 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 CYP3A43Q9HB55 503 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 IFNKQ9P0W0 207 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 APEX2Q9UBZ4 518 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 SNX9Q9Y5X1 595 aa19.74■□□□□ 0.75
HDAC6-208ENST00000438518 RANBP2P49792 3224 aaKnown RBP19.74■□□□□ 0.75
HDAC6-208ENST00000438518 GOLGA6L3A6NEY3 463 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 H3BNC9 293 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 CYB561D2O14569 222 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 SPTLC1O15269 473 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 TACC1O75410 805 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 FGFR3P22607 806 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 YWHAEP62258 255 aaKnown RBP19.73■□□□□ 0.75
HDAC6-208ENST00000438518 KCNMA1Q12791 1236 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 USP41Q3LFD5 358 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 LIMS2Q7Z4I7 341 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 METTL23Q86XA0 190 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 FBXO22Q8NEZ5 403 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 HASPINQ8TF76 798 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 RABGGTAQ92696 567 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 NAP1L5Q96NT1 182 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-208ENST00000438518 DNAI2Q9GZS0 605 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 FBXL5Q9UKA1 691 aa19.73■□□□□ 0.75
HDAC6-208ENST00000438518 ARHGEF15O94989 841 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 BRCC3P46736 316 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 SYCP1Q15431 976 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms