RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MSTO1Q9BUK6 570 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 EMILIN2Q9BXX0 1053 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 TRIM9Q9C026 710 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 TNMDQ9H2S6 317 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 ADAM7Q9H2U9 754 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 OLFML3Q9NRN5 406 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 PANK4Q9NVE7 773 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 DZANK1Q9NVP4 752 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 FNIP2Q9P278 1114 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 SEL1LQ9UBV2 794 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 STK39Q9UEW8 545 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 MUTYHQ9UIF7 546 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 CPSF3Q9UKF6 684 aaKnown RBP9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 DENND4CQ5VZ89 1909 aa9.3□□□□□ -0.92
HERPUD2-206ENST00000438224 C2CD4DB7Z1M9 353 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 POLR2DO15514 142 aaKnown RBP9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 TGM5O43548 720 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 PRPF6O94906 941 aaKnown RBP9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 GCNT3O95395 438 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 PAPLNO95428 1278 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 NFICP08651 508 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 ITIH3Q06033 890 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 EHHADHQ08426 723 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 NCOA4Q13772 614 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 HERC4Q5GLZ8 1057 aaPredicted RBP9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 SCARA3Q6AZY7 606 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 ATL3Q6DD88 541 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 JADE1Q6IE81 842 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 GPR149Q86SP6 731 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 HVCN1Q96D96 273 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 UROC1Q96N76 676 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 SFXN1Q9H9B4 322 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 MRPL44Q9H9J2 332 aaKnown RBP9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 SLC38A7Q9NVC3 462 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 MTRRQ9UBK8 725 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 RAPGEFL1Q9UHV5 662 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 FBXW11Q9UKB1 542 aa9.29□□□□□ -0.92
HERPUD2-206ENST00000438224 OBSL1O75147 1896 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 DCXO43602 365 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 ACTN4O43707 911 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 TBC1D4O60343 1298 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 N4BP1O75113 896 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 SCP2P22307 547 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 LRPAP1P30533 357 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 MTHFRP42898 656 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 ASIC1P78348 528 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 PPP2R3AQ06190 1150 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 ELAVL2Q12926 359 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 EPM2AIP1Q7L775 607 aaPredicted RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 EFCAB13Q8IY85 973 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 TMEM87AQ8NBN3 555 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 KREMEN2Q8NCW0 462 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 CMASQ8NFW8 434 aaPredicted RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 SAAL1Q96ER3 474 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 SUSD3Q96L08 255 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 POP1Q99575 1024 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 C7orf25Q9BPX7 421 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 CBWD1Q9BRT8 395 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 BLZF1Q9H2G9 400 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 CUEDC2Q9H467 287 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 RPF1Q9H9Y2 349 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 FKBPLQ9UIM3 349 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 AGO2Q9UKV8 859 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 SSX2IPQ9Y2D8 614 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 PTPRDP23468 1912 aa9.28□□□□□ -0.92
HERPUD2-206ENST00000438224 CACNA1HO95180 2353 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 CCDC195A0A1B0GUA6 201 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 A0A1B0GVL5 298 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 GOLGA8IPA6NC78 632 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 GOLGA8JA6NMD2 632 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 KLRC4O43908 158 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 LZTS3O60299 673 aaPredicted RBP9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 PFKFB1P16118 471 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 RPL9P32969 192 aaKnown RBP9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 OR1D2P34982 312 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 AFMP43652 599 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 AARSP49588 968 aaKnown RBP eCLIP9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 ROR1Q01973 937 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 CUL4BQ13620 913 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 RAB33AQ14088 237 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 MRPL58Q14197 206 aaKnown RBP9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 SPATA1Q5VX52 437 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 ADALQ6DHV7 355 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 CES5AQ6NT32 575 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 LYPD8Q6UX82 237 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 CCDC65Q8IXS2 484 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 IQUBQ8NA54 791 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 ZNF592Q92610 1267 aa9.27□□□□□ -0.93
HERPUD2-206ENST00000438224 SPATA32Q96LK8 384 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms