RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 WASP42768 502 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 IKZF1Q13422 519 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 CCDC38Q502W7 563 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 TLDC1Q6P9B6 456 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 RPGRQ92834 1020 aaKnown RBP7.22□□□□□ -1.25
SPEN-202ENST00000438066 FAM89AQ96GI7 184 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 EIF2AK1Q9BQI3 630 aaKnown RBP7.22□□□□□ -1.25
SPEN-202ENST00000438066 LSG1Q9H089 658 aaKnown RBP7.22□□□□□ -1.25
SPEN-202ENST00000438066 BTBD1Q9H0C5 482 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 STARD7Q9NQZ5 370 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 SCOCQ9UIL1 159 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 ACSL6Q9UKU0 697 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 SYNPO2Q9UMS6 1093 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 PCDHB6Q9Y5E3 794 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 CFAP20Q9Y6A4 193 aaKnown RBP7.22□□□□□ -1.25
SPEN-202ENST00000438066 AKAP11Q9UKA4 1901 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 EP400Q96L91 3159 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
SPEN-202ENST00000438066 OPHN1O60890 802 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 CAMTA2O94983 1202 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 COL6A1P12109 1028 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 HSPA4P34932 840 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 ZNF543Q08ER8 600 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 NOMO1Q15155 1222 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 NR0B2Q15466 257 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 LRRC24Q50LG9 513 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 BTNL9Q6UXG8 535 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 DRC7Q8IY82 874 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 SYNE4Q8N205 404 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 CCDC33Q8N5R6 958 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 GREM2Q9H772 168 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 KIAA1586Q9HCI6 787 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 AGO4Q9HCK5 861 aaKnown RBP7.21□□□□□ -1.25
SPEN-202ENST00000438066 DIAPH3Q9NSV4 1193 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 SLC4A7Q9Y6M7 1214 aa7.21□□□□□ -1.25
SPEN-202ENST00000438066 BRWD3Q6RI45 1802 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 HIP1O00291 1037 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 PTGS1P23219 599 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 MCCP23508 829 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 CTSWP56202 376 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 CYP4F8P98187 520 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 PPP3CAQ08209 521 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 CCDC57Q2TAC2 916 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 THEMIS2Q5TEJ8 643 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 HIBCHQ6NVY1 386 aaPredicted RBP7.21□□□□□ -1.26
SPEN-202ENST00000438066 CWC27Q6UX04 472 aaKnown RBP7.21□□□□□ -1.26
SPEN-202ENST00000438066 TTC7BQ86TV6 843 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 RHOT1Q8IXI2 618 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 ANKS4BQ8N8V4 417 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 NETO2Q8NC67 525 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 TTLL11Q8NHH1 800 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 RUFY2Q8WXA3 655 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 RAB24Q969Q5 203 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 SLC35A4Q96G79 324 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 MPP4Q96JB8 637 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 NOL10Q9BSC4 688 aaKnown RBP7.21□□□□□ -1.26
SPEN-202ENST00000438066 PUS3Q9BZE2 481 aaKnown RBP7.21□□□□□ -1.26
SPEN-202ENST00000438066 BOLA2Q9H3K6 86 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 SLC39A2Q9NP94 309 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 CHMP5Q9NZZ3 219 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 MAGED2Q9UNF1 606 aaPredicted RBP7.21□□□□□ -1.26
SPEN-202ENST00000438066 GPR52Q9Y2T5 361 aa7.21□□□□□ -1.26
SPEN-202ENST00000438066 PRRT4C9JH25 899 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 H3BUI4 141 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 FRAT2O75474 233 aaPredicted RBP7.2□□□□□ -1.26
SPEN-202ENST00000438066 MPIG6BO95866 241 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 EFEMP2O95967 443 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 THBS2P35442 1172 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 PUM3Q15397 648 aaKnown RBP7.2□□□□□ -1.26
SPEN-202ENST00000438066 JAKMIP3Q5VZ66 844 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 CD276Q5ZPR3 534 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 LRSAM1Q6UWE0 723 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 PTF1AQ7RTS3 328 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 SH2D3CQ8N5H7 860 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 ZSCAN18Q8TBC5 510 aaPredicted RBP7.2□□□□□ -1.26
SPEN-202ENST00000438066 ARL8AQ96BM9 186 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 C7orf25Q9BPX7 421 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 TRMT112Q9UI30 125 aaKnown RBP7.2□□□□□ -1.26
SPEN-202ENST00000438066 TMEM59LQ9UK28 342 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 AFF2P51816 1311 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 CCDC171Q6TFL3 1326 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 RTL9Q8NET4 1388 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 ABCC12Q96J65 1359 aa7.2□□□□□ -1.26
SPEN-202ENST00000438066 DOCK2Q92608 1830 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 MYO5AQ9Y4I1 1855 aaKnown RBP7.19□□□□□ -1.26
SPEN-202ENST00000438066 A0A0D9SFI3 127 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 A0A1B0GUL7 405 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 NOTOA8MTQ0 251 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 DDX3XO00571 662 aaKnown RBP eCLIP7.19□□□□□ -1.263e-6■□□□□ 10.3
SPEN-202ENST00000438066 PHGDHO43175 533 aaKnown RBP7.19□□□□□ -1.26
SPEN-202ENST00000438066 FAM163BP0C2L3 166 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 KITP10721 976 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 TSHRP16473 764 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 FUT4P22083 530 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 MAN1A1P33908 653 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 HK2P52789 917 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 GEMIN4P57678 1058 aaKnown RBP7.19□□□□□ -1.26
SPEN-202ENST00000438066 ICA1Q05084 483 aa7.19□□□□□ -1.26
SPEN-202ENST00000438066 NOGQ13253 232 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms