RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SP110Q9HB58 689 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 MCM8Q9UJA3 840 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ECDO95905 644 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 FOXD4Q12950 439 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 IRGCQ6NXR0 463 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 NMD3Q96D46 503 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 VTA1Q9NP79 307 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 MLNP12872 115 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 SARSP49591 514 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 TTC27Q6P3X3 843 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 G2E3Q7L622 706 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 PPP1R14BQ96C90 147 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 KLHL18O94889 574 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 GJA8P48165 433 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 FNTAP49354 379 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 TCP10Q12799 353 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ELMOD1Q8N336 334 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 RMND5AQ9H871 391 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 GEMIN4P57678 1058 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 DDR2Q16832 855 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 CMTR1Q8N1G2 835 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 FAM81AQ8TBF8 368 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 REXO4Q9GZR2 422 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 DMAP1Q9NPF5 467 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 NEU2Q9Y3R4 380 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 PIPSLA2A3N6 862 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 KATNA1O75449 491 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 BCAP31P51572 246 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ANO4Q32M45 955 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 SPDYAQ5MJ70 313 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 FAM180AQ6UWF9 173 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 BNC2Q6ZN30 1099 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 WNK4Q96J92 1243 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 KIFC1Q9BW19 673 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 HEMGNQ9BXL5 484 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 SLC7A5P2Q9GIP4 190 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ZC3H7BQ9UGR2 993 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 VWA5AO00534 786 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 FTLP02792 175 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 CNTFP26441 200 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ING3Q9NXR8 418 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 LIN7AO14910 233 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 CD58P19256 250 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 MAPK1P28482 360 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 GNA15P30679 374 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 KRT78Q8N1N4 520 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 HPS3Q969F9 1004 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 SLC52A2Q9HAB3 445 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 TAGLN3Q9UI15 199 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 TPRKBQ9Y3C4 175 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ESYT3A0FGR9 886 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 K7ERI5 159 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 PTPN4P29074 926 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 TUBA3CQ13748 450 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 PIGHQ14442 188 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 CCDC33Q8N5R6 958 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 WDR36Q8NI36 951 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 WDR35Q9P2L0 1181 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 XPO7Q9UIA9 1087 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 MYRFQ9Y2G1 1151 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 EIF3EP60228 445 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ATP1A4Q13733 1029 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 KCNB1Q14721 858 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 WDR93Q6P2C0 686 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 TTC30AQ86WT1 665 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 MOSPD2Q8NHP6 518 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 C17orf50Q8WW18 174 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ILKAPQ9H0C8 392 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 AMACRQ9UHK6 382 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 TM9SF1O15321 606 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 PECAM1P16284 738 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 RPS6P62753 249 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 MEI1Q5TIA1 1274 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 DGCR14Q96DF8 476 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ZNF594Q96JF6 807 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 B3GALT6Q96L58 329 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ABT1Q9ULW3 272 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 MDH1BQ5I0G3 518 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms