RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 KPNA7A9QM74 516 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 SOX1O00570 391 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-205ENST00000433439 PNPLA4P41247 253 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 LILRA4P59901 499 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 MCCD1P59942 119 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-205ENST00000433439 UBXN1Q04323 297 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 TIGD5Q53EQ6 642 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 WDR44Q5JSH3 913 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 CD300LGQ6UXG3 332 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 LRRC52Q8N7C0 313 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-205ENST00000433439 MMS19Q96T76 1030 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 C11orf84Q9BUA3 381 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-205ENST00000433439 GPR62Q9BZJ7 368 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 GCNT4Q9P109 453 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 POLIQ9UNA4 740 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 TIMM13Q9Y5L4 95 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-205ENST00000433439 SNX9Q9Y5X1 595 aa16.5■□□□□ 0.23
CNOT9-205ENST00000433439 SF3B1O75533 1304 aaKnown RBP eCLIP16.49■□□□□ 0.23
CNOT9-205ENST00000433439 CARNS1A5YM72 827 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 RFXAPO00287 272 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 CYB561D2O14569 222 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 TRAPPC3O43617 180 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 ATICP31939 592 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 TNNC1P63316 161 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 GPM6BQ13491 265 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 PTPN21Q16825 1174 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 WDR72Q3MJ13 1102 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 ZNF667Q5HYK9 610 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 SCARA5Q6ZMJ2 495 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 GBP6Q6ZN66 633 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 APTXQ7Z2E3 356 aaKnown RBP16.49■□□□□ 0.23
CNOT9-205ENST00000433439 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 PLVAPQ9BX97 442 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 INTS2Q9H0H0 1204 aaKnown RBP16.49■□□□□ 0.23
CNOT9-205ENST00000433439 ZNF576Q9H609 170 aa16.49■□□□□ 0.23
CNOT9-205ENST00000433439 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
CNOT9-205ENST00000433439 COL6A3P12111 3177 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 LGALS16A8MUM7 142 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 C2CD2LO14523 706 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 P4HA2O15460 535 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 RB1P06400 928 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 TKTP29401 623 aaKnown RBP16.48■□□□□ 0.23
CNOT9-205ENST00000433439 UBASH3AP57075 661 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
CNOT9-205ENST00000433439 EXOC3L4Q17RC7 722 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 KIAA1841Q6NSI8 718 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 TAS1R1Q7RTX1 841 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 VPS52Q8N1B4 723 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 EHBP1Q8NDI1 1231 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 TATDN2Q93075 761 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 SUSD3Q96L08 255 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
CNOT9-205ENST00000433439 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 XYLT2Q9H1B5 865 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
CNOT9-205ENST00000433439 EPOPA6NHQ4 379 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 LRRC10BA6NIK2 292 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 C5orf67F2Z3F1 127 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 GRM6O15303 877 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 TEX33O43247 280 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 HUS1O60921 280 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 ASS1P00966 412 aaKnown RBP16.47■□□□□ 0.23
CNOT9-205ENST00000433439 SLC9A1P19634 815 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 RAP1GAPP47736 663 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 PLCB3Q01970 1234 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 APBA1Q02410 837 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 ELAVL2Q12926 359 aaKnown RBP16.47■□□□□ 0.23
CNOT9-205ENST00000433439 DDX53Q86TM3 631 aaKnown RBP16.47■□□□□ 0.23
CNOT9-205ENST00000433439 SPPL3Q8TCT6 385 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 MICAL1Q8TDZ2 1067 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 POF1BQ8WVV4 589 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 FAM161BQ96MY7 647 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 NT5C1BQ96P26 610 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
CNOT9-205ENST00000433439 APOBEC3GQ9HC16 384 aaKnown RBP16.47■□□□□ 0.23
CNOT9-205ENST00000433439 PLXNA4Q9HCM2 1894 aa16.47■□□□□ 0.23
CNOT9-205ENST00000433439 H3BNC9 293 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 ODC1P11926 461 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 P4HA1P13674 534 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 KCNMA1Q12791 1236 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 SYCP1Q15431 976 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 USP41Q3LFD5 358 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 ZNF697Q5TEC3 545 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 WSCD1Q658N2 575 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 TMC7Q7Z402 723 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 METTL23Q86XA0 190 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 PPM1KQ8N3J5 372 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 APPL2Q8NEU8 664 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.23
CNOT9-205ENST00000433439 TAF4BQ92750 862 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms