RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 EFTUD2Q15029 972 aaKnown RBP eCLIP12.21□□□□□ -0.452e-8■■■□□ 17.4
HMGCS1-202ENST00000433297 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 NMD3Q96D46 503 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 TMEM120AQ9BXJ8 343 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 MANSC1Q9H8J5 431 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 SLC17A7Q9P2U7 560 aa12.21□□□□□ -0.45
HMGCS1-202ENST00000433297 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 CCDC160A6NGH7 325 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 A6NJR5 290 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 K7ENM7 598 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 KRT10P13645 584 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 MUTP22033 750 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 MAN1A1P33908 653 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 NFIXQ14938 502 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 THTPAQ9BU02 230 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 SPATA16Q9BXB7 569 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 GALNT8Q9NY28 637 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 KANSL3Q9P2N6 904 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.46
HMGCS1-202ENST00000433297 TXNDC9O14530 226 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 PRPF4O43172 522 aaKnown RBP eCLIP12.2□□□□□ -0.467e-10■■■■□ 23.2
HMGCS1-202ENST00000433297 PFDN1O60925 122 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 BBOF1Q8ND07 529 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 CBWD1Q9BRT8 395 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 CENPKQ9BS16 269 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 TSSK1BQ9BXA7 367 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM192AQ9GZU8 254 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 TLE6Q9H808 572 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 LARSQ9P2J5 1176 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 MEIS2O14770 477 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 SPATA31D3P0C874 917 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 CYP11B1P15538 503 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 MXI1P50539 228 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 ARSEP51690 589 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 DSG1Q02413 1049 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 MTMR2Q13614 643 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 CEP128Q6ZU80 1094 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 SPATA31D4Q6ZUB0 917 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 SYDE1Q6ZW31 735 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 SETDB2Q96T68 719 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 ZNF212Q9UDV6 495 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 EIF3DO15371 548 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 CYP1A2P05177 515 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 KITP10721 976 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 GZMAP12544 262 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 SSTR1P30872 391 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 LIN52Q52LA3 116 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 C6orf163Q5TEZ5 329 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 RIBC1Q8N443 379 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 SLCO2A1Q92959 643 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 HIC2Q96JB3 615 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 ETNK2Q9NVF9 386 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 PKD2L1Q9P0L9 805 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 UVRAGQ9P2Y5 699 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 NOCTQ9UK39 431 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 ANGPTL2Q9UKU9 493 aa12.2□□□□□ -0.46
HMGCS1-202ENST00000433297 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 HNRNPCL1O60812 293 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 MYL2P10916 166 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 C1orf146Q5VVC0 180 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 HIPK4Q8NE63 616 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 FBXO27Q8NI29 283 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 KREMEN1Q96MU8 473 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 NDE1Q9NXR1 346 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 EURLQ9NYK6 297 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 CLIC5Q9NZA1 410 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 RPL26L1Q9UNX3 145 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 HNRNPRO43390 633 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 CIB2O75838 187 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 ATP13A4Q4VNC1 1196 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 ZCCHC9Q8N567 271 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 PTCD3Q96EY7 689 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM84AQ96KN4 292 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 OSBPL8Q9BZF1 889 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 STK10O94804 968 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 SLITRK3O94933 977 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 ANPEPP15144 967 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 ARHGAP24Q8N264 748 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 ARHGAP18Q8N392 663 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 DTNBP1Q96EV8 351 aa12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 PSMC3IPQ9P2W1 217 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms