RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 SLC27A1Q6PCB7 646 aa16.18■□□□□ 0.18
SF1-209ENST00000433274 USP38Q8NB14 1042 aa16.18■□□□□ 0.18
SF1-209ENST00000433274 ZNF606Q8WXB4 792 aa16.18■□□□□ 0.18
SF1-209ENST00000433274 CALR3Q96L12 384 aaKnown RBP16.18■□□□□ 0.18
SF1-209ENST00000433274 HINFPQ9BQA5 517 aa16.18■□□□□ 0.18
SF1-209ENST00000433274 CCDC94Q9BW85 323 aaPredicted RBP16.18■□□□□ 0.18
SF1-209ENST00000433274 EIF2AQ9BY44 585 aaKnown RBP16.18■□□□□ 0.18
SF1-209ENST00000433274 UVRAGQ9P2Y5 699 aa16.18■□□□□ 0.18
SF1-209ENST00000433274 ZRANB2O95218 330 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■□□ 14.8
SF1-209ENST00000433274 NOMO3P69849 1222 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 SNX17Q15036 470 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 WDR93Q6P2C0 686 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 TRIM72Q6ZMU5 477 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 HDAC7Q8WUI4 952 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 SNTG2Q9NY99 539 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 HES2Q9Y543 173 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 TARSL2A2RTX5 802 aaKnown RBP16.17■□□□□ 0.18
SF1-209ENST00000433274 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 TUBBP07437 444 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 GNAT1P11488 350 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 RRM1P23921 792 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 BRD2P25440 801 aaKnown RBP16.17■□□□□ 0.18
SF1-209ENST00000433274 POLR2BP30876 1174 aaKnown RBP16.17■□□□□ 0.18
SF1-209ENST00000433274 CAP1Q01518 475 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 LLGL2Q6P1M3 1020 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 CXorf38Q8TB03 319 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 ACTRT1Q8TDG2 376 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 C11orf70Q9BRQ4 267 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 CXCL16Q9H2A7 254 aa16.17■□□□□ 0.18
SF1-209ENST00000433274 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 PGRMC1O00264 195 aaKnown RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 ERLIN1O75477 346 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 COMTP21964 271 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 CDH8P55286 799 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 GJA9P57773 515 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 NOGQ13253 232 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 LONRF2Q1L5Z9 754 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 CXCL17Q6UXB2 119 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 MON1BQ7L1V2 547 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 DPP3Q9NY33 737 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 AGAP1Q9UPQ3 857 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 NOC2LQ9Y3T9 749 aaKnown RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 C2CD2Q9Y426 696 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 YWHAEP62258 255 aaKnown RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 SLC7A5Q01650 507 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 DCAF12L1Q5VU92 463 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 C8orf74Q6P047 294 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 HNRNPLLQ8WVV9 542 aaKnown RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 ALG3Q92685 438 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 TRIM11Q96F44 468 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 ZSWIM1Q9BR11 485 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■■□□ 15.6
SF1-209ENST00000433274 MTG1Q9BT17 334 aaPredicted RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
SF1-209ENST00000433274 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 ADAM22Q9P0K1 906 aa16.16■□□□□ 0.18
SF1-209ENST00000433274 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
SF1-209ENST00000433274 MYBL1P10243 752 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 MMS22LQ6ZRQ5 1243 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 KRT35Q92764 455 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 HPDLQ96IR7 371 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 KRT12Q99456 494 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 APOL6Q9BWW8 343 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 AP1M1Q9BXS5 423 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 SDCBP2Q9H190 292 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 DMGDHQ9UI17 866 aaKnown RBP16.15■□□□□ 0.18
SF1-209ENST00000433274 ANAPC7Q9UJX3 599 aa16.15■□□□□ 0.18
SF1-209ENST00000433274 SPOPO43791 374 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 HOXC8P31273 242 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 ATICP31939 592 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 MARCKSL1P49006 195 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 CACNB2Q08289 660 aaPredicted RBP16.14■□□□□ 0.18
SF1-209ENST00000433274 ZNF211Q13398 564 aaPredicted RBP16.14■□□□□ 0.18
SF1-209ENST00000433274 PCBP1Q15365 356 aaKnown RBP eCLIP16.14■□□□□ 0.187e-8■■■□□ 17
SF1-209ENST00000433274 BEND6Q5SZJ8 279 aaPredicted RBP16.14■□□□□ 0.18
SF1-209ENST00000433274 RASGEF1CQ8N431 466 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 TFAP2BQ92481 460 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 TRIM7Q9C029 511 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.18
SF1-209ENST00000433274 PLEKHA4Q9H4M7 779 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 SPC25Q9HBM1 224 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 AVENQ9NQS1 362 aaPredicted RBP16.14■□□□□ 0.18
SF1-209ENST00000433274 ITGA11Q9UKX5 1188 aa16.14■□□□□ 0.18
SF1-209ENST00000433274 MIF4GDA9UHW6 222 aaKnown RBP16.14■□□□□ 0.17
SF1-209ENST00000433274 KPNA6O60684 536 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 RARBP10826 455 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 CD19P15391 556 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 MCM3P25205 808 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 YARSP54577 528 aaKnown RBP16.14■□□□□ 0.17
SF1-209ENST00000433274 ORC1Q13415 861 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 NBPF20Q3BBV1 942 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 LIN9Q5TKA1 542 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 CD302Q8IX05 232 aa16.14■□□□□ 0.17
SF1-209ENST00000433274 KLHL7Q8IXQ5 586 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms