RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 EPM2AIP1Q7L775 607 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 FMR1NBQ8N0W7 255 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 GPD1LQ8N335 351 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 FEZF2Q8TBJ5 459 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 SCFD1Q8WVM8 642 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CCDC47Q96A33 483 aaKnown RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 FAM84AQ96KN4 292 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 UROC1Q96N76 676 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 HERC2P3Q9BVR0 1158 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 COL25A1Q9BXS0 654 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 PRDM9Q9NQV7 894 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CHST7Q9NS84 486 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 EXOC1Q9NV70 894 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 SLC38A7Q9NVC3 462 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 EVA1BQ9NVM1 165 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CNTN3Q9P232 1028 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CD207Q9UJ71 328 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CDH22Q9UJ99 828 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 UBQLN1Q9UMX0 589 aaKnown RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 SSX2IPQ9Y2D8 614 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 TIMM13Q9Y5L4 95 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 HCFC2Q9Y5Z7 792 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 VWA8A3KMH1 1905 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 MTCL1Q9Y4B5 1905 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 MYO7AQ13402 2215 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CARNS1A5YM72 827 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 PPEF2O14830 753 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 TEX28O15482 410 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADAM12O43184 909 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 MBTPS2O43462 519 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 TRAPPC3O43617 180 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 EXTL3O43909 919 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 EFEMP2O95967 443 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 KRT19P08727 400 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 SRGAP2BP0DMP2 458 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 GARTP22102 1010 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 SP100P23497 879 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 TKTP29401 623 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 RPL9P32969 192 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 OR1D2P34982 312 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ABL2P42684 1182 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 TFAMQ00059 246 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 DSG1Q02413 1049 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 FAM160A1Q05DH4 1040 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 EHHADHQ08426 723 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 KCNH2Q12809 1159 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ALCAMQ13740 583 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 TMEM132DQ14C87 1099 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 NR6A1Q15406 480 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ZBTB6Q15916 424 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 PSMD5Q16401 504 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 KNOP1Q1ED39 458 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 RARS2Q5T160 578 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 SPATA1Q5VX52 437 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 LMBRD2Q68DH5 695 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CNNM4Q6P4Q7 775 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CBWD2Q8IUF1 395 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CD302Q8IX05 232 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 SMYD4Q8IYR2 804 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 RNF168Q8IYW5 571 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ENGASEQ8NFI3 743 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 BEST2Q8NFU1 509 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 LNX1Q8TBB1 728 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADAMTS19Q8TE59 1207 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 SLC22A17Q8WUG5 538 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 KCNN1Q92952 543 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CCDC127Q96BQ5 260 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 IPO9Q96P70 1041 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 POP1Q99575 1024 aaKnown RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CDCA3Q99618 268 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 CLSTN3Q9BQT9 956 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 TTPALQ9BTX7 342 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 PDE11AQ9HCR9 933 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 DPP3Q9NY33 737 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 RBAKQ9NYW8 714 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 HSPBP1Q9NZL4 362 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 AGAP1Q9UPQ3 857 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 IRAK3Q9Y616 596 aa6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 SF3B1O75533 1304 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB3P24-201ENST00000433260 ZMYM2Q9UBW7 1377 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CCDC195A0A1B0GUA6 201 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 ZNF233A6NK53 670 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 PIRO00625 290 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 EIF3DO15371 548 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 ZBTB24O43167 697 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 TGM5O43548 720 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 XPOTO43592 962 aaKnown RBP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 EXOC3O60645 756 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 MYL1P05976 194 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADH1AP07327 375 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADRB2P07550 413 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 TNNI1P19237 187 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CYP3A5P20815 502 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 FGFR3P22607 806 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CLCN4P51793 760 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 ELAVL2Q12926 359 aaKnown RBP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 KCNC3Q14003 757 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CAMK4Q16566 473 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms