RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 C11orf63Q6NUN7 778 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 SLC39A4Q6P5W5 647 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 C2orf40Q9H1Z8 148 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 SEMA4AQ9H3S1 761 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 RNF19AQ9NV58 838 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 PARVAQ9NVD7 372 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 AFG3L2Q9Y4W6 797 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 NUB1Q9Y5A7 615 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 CDK5RAP2Q96SN8 1893 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 OGTO15294 1046 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
CLDN4-202ENST00000431918 RGS20O76081 388 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 CXCL8P10145 99 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 CHRNB2P17787 502 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
CLDN4-202ENST00000431918 CDH8P55286 799 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 GCNT1Q02742 428 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 LONRF1Q17RB8 773 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 PRELID2Q8N945 189 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 CGRRF1Q99675 332 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 SMARCAD1Q9H4L7 1026 aa12.1□□□□□ -0.47
CLDN4-202ENST00000431918 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
CLDN4-202ENST00000431918 A0A087WUV0 522 aaPredicted RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 M0QYV0 167 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 GRAP2O75791 330 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 RPL21P46778 160 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 EIF3BP55884 814 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CCDC13Q8IYE1 715 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CACNA2D3Q8IZS8 1091 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 GDAP1Q8TB36 358 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 AGAP1Q9UPQ3 857 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 GBP1P32455 592 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 SURF1Q15526 300 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 KYNUQ16719 465 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ZACNQ401N2 412 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 TRIM72Q6ZMU5 477 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 GPR88Q9GZN0 384 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 NSRP1Q9H0G5 558 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CHST7Q9NS84 486 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CES2O00748 559 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CAND2O75155 1236 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ITGB3P05106 788 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ZNF286BP0CG31 522 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 MYBL1P10243 752 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 KRT81Q14533 505 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 TMED2Q15363 201 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 SGSM1Q2NKQ1 1148 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 GKAP1Q5VSY0 366 aaPredicted RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 TMC3Q7Z5M5 1100 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 KCTD6Q8NC69 237 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 LMO3Q8TAP4 145 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ZBED3Q96IU2 234 aaPredicted RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 SAYSD1Q9NPB0 183 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ARHGAP28Q9P2N2 729 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 B4GALT5O43286 388 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
CLDN4-202ENST00000431918 SLC25A27O95847 323 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 CALB1P05937 261 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 STX2P32856 288 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ZNF844Q08AG5 666 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 GPS1Q13098 491 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 ATP13A4Q4VNC1 1196 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 IZUMO3Q5VZ72 239 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 PRUNE1Q86TP1 453 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.472e-7■■■□□ 16
CLDN4-202ENST00000431918 IP6K2Q9UHH9 426 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 PNMA3Q9UL41 463 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
CLDN4-202ENST00000431918 NFASCO94856 1347 aa12.08□□□□□ -0.47
CLDN4-202ENST00000431918 A0A087WZ62 844 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 H7C0C1 242 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ATP5OP48047 213 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 RGS7P49802 495 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 BASP1P80723 227 aaKnown RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ABRAQ8N0Z2 381 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 RNF169Q8NCN4 708 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 UBA3Q8TBC4 463 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 FEZF2Q8TBJ5 459 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms