RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KLHL7Q8IXQ5 586 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ALG3Q92685 438 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 KRT35Q92764 455 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ADPGKQ9BRR6 497 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 HAS3O00219 553 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ERLIN1O75477 346 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 C6orf222P0C671 652 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 TM4SF4P48230 202 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 CDH8P55286 799 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ORC1Q13415 861 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 IRF5Q13568 498 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 TCEAL1Q15170 157 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 AADACL2Q6P093 401 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ACTRT1Q8TDG2 376 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 HNRNPLLQ8WVV9 542 aaKnown RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 TMEM40Q8WWA1 233 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF606Q8WXB4 792 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ACAP3Q96P50 834 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ZSWIM1Q9BR11 485 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 C11orf70Q9BRQ4 267 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 EIF2AQ9BY44 585 aaKnown RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 FUT8Q9BYC5 575 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 GCOM2Q9BZD3 368 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 RNF19AQ9NV58 838 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 HES2Q9Y543 173 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 SMIM35A0A1B0GVV1 85 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 PGRMC1O00264 195 aaKnown RBP17.79■□□□□ 0.44
USHBP1-203ENST00000431146 NOMO3P69849 1222 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 ADAM17P78536 824 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 CAP1Q01518 475 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 CENPCQ03188 943 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 ADAT2Q7Z6V5 191 aaKnown RBP17.79■□□□□ 0.44
USHBP1-203ENST00000431146 TRIB2Q92519 343 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 GDAP1L1Q96MZ0 367 aa17.79■□□□□ 0.44
USHBP1-203ENST00000431146 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
USHBP1-203ENST00000431146 GPBP1L1Q9HC44 474 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-203ENST00000431146 MTA2O94776 668 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 ITGA4P13612 1032 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 AKR1A1P14550 325 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 POLR2BP30876 1174 aaKnown RBP17.78■□□□□ 0.44
USHBP1-203ENST00000431146 PURAQ00577 322 aaKnown RBP17.78■□□□□ 0.44
USHBP1-203ENST00000431146 TRIM32Q13049 653 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 TMEM132DQ14C87 1099 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 MON1BQ7L1V2 547 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 CXorf38Q8TB03 319 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 SNTG2Q9NY99 539 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 OGFRQ9NZT2 677 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 ANAPC7Q9UJX3 599 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 MROH7Q68CQ1 1323 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF667Q5HYK9 610 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 RASGEF1CQ8N431 466 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 TFAP2BQ92481 460 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 ASB7Q9H672 318 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 SMYD3Q9H7B4 428 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 UVRAGQ9P2Y5 699 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 TMEM59LQ9UK28 342 aa17.78■□□□□ 0.44
USHBP1-203ENST00000431146 TMEM88BA6NKF7 163 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 PGK1P00558 417 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 FGGP02679 453 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 DARSP14868 501 aaKnown RBP17.77■□□□□ 0.44
USHBP1-203ENST00000431146 FLT3LGP49771 235 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 MMS22LQ6ZRQ5 1243 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 RNPC3Q96LT9 517 aaKnown RBP17.77■□□□□ 0.44
USHBP1-203ENST00000431146 STIM2Q9P246 746 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 L1RE1Q9UN81 338 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 AGAP1Q9UPQ3 857 aa17.77■□□□□ 0.44
USHBP1-203ENST00000431146 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 KRIT1O00522 736 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 SPOPO43791 374 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 AOC2O75106 756 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 GJB6O95452 261 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 TUBBP07437 444 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 GLI1P08151 1106 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 FCGRTP55899 365 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 LACTBP83111 547 aaPredicted RBP17.77■□□□□ 0.43
USHBP1-203ENST00000431146 DAB2IPQ5VWQ8 1189 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 C7orf31Q8N865 590 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 KIF12Q96FN5 646 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 APOL6Q9BWW8 343 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 FAM53CQ9NYF3 392 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 ADAM22Q9P0K1 906 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 HMGXB4Q9UGU5 601 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 Q9Y3F1 56 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 NR2E1Q9Y466 385 aa17.77■□□□□ 0.43
USHBP1-203ENST00000431146 SCN1AP35498 2009 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 ESYT3A0FGR9 886 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 EIF4BP23588 611 aaKnown RBP17.76■□□□□ 0.43
USHBP1-203ENST00000431146 GRM5P41594 1212 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 PLA2G4AP47712 749 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 PRKCZQ05513 592 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 GNASQ5JWF2 1037 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 SLC27A1Q6PCB7 646 aa17.76■□□□□ 0.43
USHBP1-203ENST00000431146 CCNI2Q6ZMN8 369 aaPredicted RBP17.76■□□□□ 0.43
USHBP1-203ENST00000431146 C1orf131Q8NDD1 294 aaKnown RBP17.76■□□□□ 0.43
USHBP1-203ENST00000431146 DDX47Q9H0S4 455 aaKnown RBP17.76■□□□□ 0.43
USHBP1-203ENST00000431146 NXF3Q9H4D5 531 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms