RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 OAZ2O95190 189 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 POU2F2P09086 479 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 TYMPP19971 482 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 ELF1P32519 619 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 HOXD13P35453 343 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 PSMD2Q13200 908 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 SURF1Q15526 300 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 BMT2Q1RMZ1 405 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 TPGS2Q68CL5 300 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 HS2ST1Q7LGA3 356 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 USP37Q86T82 979 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 EFCAB13Q8IY85 973 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 TMEM130Q8N3G9 435 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 FSIP1Q8NA03 581 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 ZSWIM2Q8NEG5 633 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 SLC7A14Q8TBB6 771 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 CACTINQ8WUQ7 758 aaKnown RBP10.62□□□□□ -0.71
HDAC6-207ENST00000430858 EDAQ92838 391 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 CCDC34Q96HJ3 373 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 SLC39A2Q9NP94 309 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 AGPAT3Q9NRZ7 376 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 DPP3Q9NY33 737 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 HSPBP1Q9NZL4 362 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 CGNQ9P2M7 1197 aaKnown RBP10.62□□□□□ -0.71
HDAC6-207ENST00000430858 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
HDAC6-207ENST00000430858 VWA8A3KMH1 1905 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 WDR27A2RRH5 827 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 OR6C75A6NL08 312 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 PRR33A8MZF0 331 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 PPEF2O14830 753 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 TGFB1I1O43294 461 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 ODC1P11926 461 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 ATF2P15336 505 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 PNPLA4P41247 253 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 TAF6P49848 677 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 ARPP19P56211 112 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 ZXDAP98168 799 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 TFAMQ00059 246 aaKnown RBP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 PTPN21Q16825 1174 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 KNOP1Q1ED39 458 aaKnown RBP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 C12orf56Q8IXR9 622 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 CCDC47Q96A33 483 aaKnown RBP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 ZNF560Q96MR9 790 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 PDE11AQ9HCR9 933 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 C11orf16Q9NQ32 467 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 AFF4Q9UHB7 1163 aaKnown RBP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 ITGA11Q9UKX5 1188 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 DSEQ9UL01 958 aa10.61□□□□□ -0.71
HDAC6-207ENST00000430858 TIMM13Q9Y5L4 95 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-207ENST00000430858 PLXNA3P51805 1871 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 PDCD11Q14690 1871 aaKnown RBP10.6□□□□□ -0.71
HDAC6-207ENST00000430858 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 FAM86C2PA6NEL3 165 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-207ENST00000430858 PRRG1O14668 218 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 SPTLC1O15269 473 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 CCL16O15467 120 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 ZNF202O95125 648 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 RPN1P04843 607 aaKnown RBP10.6□□□□□ -0.71
HDAC6-207ENST00000430858 CYP11A1P05108 521 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 TMEM191BP0C7N4 346 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 CPB1P15086 417 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 GBP2P32456 591 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-207ENST00000430858 WNT7BP56706 349 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 STK4Q13043 487 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 MYBPC2Q14324 1141 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 SV2CQ496J9 727 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 OVOS1Q6IE37 1185 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-207ENST00000430858 CBWD2Q8IUF1 395 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 LRRC52Q8N7C0 313 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 C1orf127Q8N9H9 656 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 XXYLT1Q8NBI6 393 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 KIAA0895Q8NCT3 520 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 GOLGA5Q8TBA6 731 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 ANKRD36BP1Q96IX9 119 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 LRFN3Q9BTN0 628 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 GOLPH3LQ9H4A5 285 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 CYP4F11Q9HBI6 524 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 LIMD1Q9UGP4 676 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 POLIQ9UNA4 740 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 SORCS3Q9UPU3 1222 aa10.6□□□□□ -0.71
HDAC6-207ENST00000430858 KPNA7A9QM74 516 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 CYB561D2O14569 222 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 CLIC2O15247 247 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 RHOBTB3O94955 611 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 KIF20AO95235 890 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 LRG1P02750 347 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 ITGB3P05106 788 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 FSHRP23945 695 aa10.59□□□□□ -0.71
HDAC6-207ENST00000430858 POLR2BP30876 1174 aaKnown RBP10.59□□□□□ -0.71
HDAC6-207ENST00000430858 RBP5P82980 135 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms