RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SPATA21Q7Z572 469 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 CROCCP2Q86T23 111 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 EXOC3L1Q86VI1 746 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 PALM2Q8IXS6 379 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 PLEKHO2Q8TD55 490 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 PARD3BQ8TEW8 1205 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ATP6V0A1Q93050 837 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ATG4CQ96DT6 458 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 WRNIP1Q96S55 665 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 SMC6Q96SB8 1091 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 RIT2Q99578 217 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 TARS2Q9BW92 718 aaKnown RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 OSBPL8Q9BZF1 889 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 RPAP3Q9H6T3 665 aaPredicted RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 RBAKQ9NYW8 714 aaPredicted RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 SAE1Q9UBE0 346 aaPredicted RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 PNMA3Q9UL41 463 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 USP15Q9Y4E8 981 aaPredicted RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 RREB1Q92766 1687 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 PLIN4Q96Q06 1357 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ARAP2Q8WZ64 1704 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 A0A1B0GUA9 196 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 DIAPH2O60879 1101 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 WEE2P0C1S8 567 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 PCK1P35558 622 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 IGBP1P78318 339 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 CDO1Q16878 200 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 CYP4A22Q5TCH4 519 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 BSPRYQ5W0U4 402 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 ACAD10Q6JQN1 1059 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 DNAJC24Q6P3W2 148 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 C16orf87Q6PH81 154 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 ANKRD35Q8N283 1001 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 GPD1LQ8N335 351 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 RSAD2Q8WXG1 361 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 STAMBPL1Q96FJ0 436 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 CLMNQ96JQ2 1002 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 PAGR1Q9BTK6 254 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 KIF9Q9HAQ2 790 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 GBA2Q9HCG7 927 aaPredicted RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 TBC1D22BQ9NU19 505 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 GINM1Q9NU53 330 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 PCDHA10Q9Y5I2 948 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 RPTORQ8N122 1335 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 NAV1Q8NEY1 1877 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 A0A0G2JND7 137 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 BANF1O75531 89 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 ALDH3A1P30838 453 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 SLC8A1P32418 973 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 GBP1P32455 592 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 IRX4P78413 519 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 MXRA7P84157 204 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 OVGP1Q12889 678 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 PDIA2Q13087 525 aaKnown RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 PPP1R21Q6ZMI0 780 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 FAM151AQ8WW52 585 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 MCEEQ96PE7 176 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 TMEM8AQ9HCN3 771 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 GRHL1Q9NZI5 618 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 AGO2Q9UKV8 859 aaKnown RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 NCANO14594 1321 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 TMEM88BA6NKF7 163 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 CAP2P40123 477 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 HMGCS2P54868 508 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 ZDHHC14Q8IZN3 488 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 SYTL5Q8TDW5 730 aaPredicted RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 MAIP1Q8WWC4 291 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 SLC7A3Q8WY07 619 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 HSPH1Q92598 858 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 ERP27Q96DN0 273 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 CDCA5Q96FF9 252 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 MBOAT7Q96N66 472 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 GPR88Q9GZN0 384 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 AGO4Q9HCK5 861 aaKnown RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 MAP3K20Q9NYL2 800 aaKnown RBP8.53□□□□□ -1.04
HPS4-205ENST00000429411 UVRAGQ9P2Y5 699 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 KAT6AQ92794 2004 aa8.53□□□□□ -1.04
HPS4-205ENST00000429411 A8MUI8 341 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 PEX10O60683 326 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 NR3C2P08235 984 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 CHRNB2P17787 502 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 RFX1P22670 979 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 PAX7P23759 505 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 YWHAGP61981 247 aaKnown RBP eCLIP8.52□□□□□ -1.05
HPS4-205ENST00000429411 SUGP1Q8IWZ8 645 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 RHOT1Q8IXI2 618 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 TMEM237Q96Q45 408 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 ZIC5Q96T25 663 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 ZDHHC18Q9NUE0 388 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 INO80B-WBP1J3KQ70 363 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 CPP00450 1065 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms