RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 PCDHGC3Q9UN70 934 aa20.27■□□□□ 0.84
HDAC10-204ENST00000429374 PAEPP09466 180 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 CST5P28325 142 aaPredicted RBP20.27■□□□□ 0.83
HDAC10-204ENST00000429374 CXCR5P32302 372 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 NSFP46459 744 aaKnown RBP20.27■□□□□ 0.83
HDAC10-204ENST00000429374 CLCN6P51797 869 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 YARSP54577 528 aaKnown RBP20.27■□□□□ 0.83
HDAC10-204ENST00000429374 NOMO3P69849 1222 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 PRKCZQ05513 592 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 ZNF653Q96CK0 615 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 PDCL3Q9H2J4 239 aa20.27■□□□□ 0.83
HDAC10-204ENST00000429374 KCNK3O14649 394 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 NPTXRO95502 500 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 GNRH1P01148 92 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
HDAC10-204ENST00000429374 CACNB2Q08289 660 aaPredicted RBP20.26■□□□□ 0.83
HDAC10-204ENST00000429374 ALKAL1Q6UXT8 129 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 ZNF564Q8TBZ8 553 aaPredicted RBP20.26■□□□□ 0.83
HDAC10-204ENST00000429374 CARD9Q9H257 536 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 DPP3Q9NY33 737 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 ALG6Q9Y672 507 aa20.26■□□□□ 0.83
HDAC10-204ENST00000429374 THAP12O43422 761 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 ADAMTS4O75173 837 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 ERLIN1O75477 346 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 ITGB3P05106 788 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 CDH5P33151 784 aaPredicted RBP20.25■□□□□ 0.83
HDAC10-204ENST00000429374 TMEM62Q0P6H9 643 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 ZBTB6Q15916 424 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 LIN9Q5TKA1 542 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 TMCO3Q6UWJ1 677 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 MON1BQ7L1V2 547 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 RSPH3Q86UC2 560 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 KLHDC9Q8NEP7 349 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 CYFIP2Q96F07 1278 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 SNX27Q96L92 541 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 NUP85Q9BW27 656 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 CELF4Q9BZC1 486 aaKnown RBP20.25■□□□□ 0.83
HDAC10-204ENST00000429374 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 CNOT8Q9UFF9 292 aaKnown RBP20.25■□□□□ 0.83
HDAC10-204ENST00000429374 LCMT1Q9UIC8 334 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 TMEM59LQ9UK28 342 aa20.25■□□□□ 0.83
HDAC10-204ENST00000429374 PACSIN2Q9UNF0 486 aaPredicted RBP20.25■□□□□ 0.83
HDAC10-204ENST00000429374 MYADML2A6NDP7 307 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 KRT19P08727 400 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 FGFR4P22455 802 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 WDR72Q3MJ13 1102 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 SCARA3Q6AZY7 606 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 PSMB7Q99436 277 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.24■□□□□ 0.833e-7■■■□□ 15.5
HDAC10-204ENST00000429374 CNTN3Q9P232 1028 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 PDCD11Q14690 1871 aaKnown RBP20.24■□□□□ 0.83
HDAC10-204ENST00000429374 M0QZ92 97 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
HDAC10-204ENST00000429374 MED7O43513 233 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 AOC2O75106 756 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 CLSTN1O94985 981 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 NBPF20Q3BBV1 942 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 XKR4Q5GH76 650 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 UBL4BQ8N7F7 174 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 LHX5Q9H2C1 402 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 MRPL47Q9HD33 250 aaKnown RBP20.24■□□□□ 0.83
HDAC10-204ENST00000429374 ARFGAP3Q9NP61 516 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 SRRDQ9UH36 339 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 KIAA1257Q9ULG3 409 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 GINS2Q9Y248 185 aa20.24■□□□□ 0.83
HDAC10-204ENST00000429374 PGRMC1O00264 195 aaKnown RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 RRP9O43818 475 aaKnown RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 ZRANB2O95218 330 aaKnown RBP eCLIP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 RHOXF2BP0C7M4 288 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 MAP2K2P36507 400 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 MRPS6P82932 125 aaKnown RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 ZNF200P98182 395 aaPredicted RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 NAA35Q5VZE5 725 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 LRRC52Q8N7C0 313 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 PCSK9Q8NBP7 692 aaKnown RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 TMEM35BQ8NCS4 154 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 BEST2Q8NFU1 509 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 KIF12Q96FN5 646 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 NAP1L3Q99457 506 aaPredicted RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 RHOXF2Q9BQY4 288 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 TRIM6Q9C030 488 aaPredicted RBP20.23■□□□□ 0.83
HDAC10-204ENST00000429374 EPC1Q9H2F5 836 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 GOLPH3Q9H4A6 298 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 SNTG2Q9NY99 539 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 AGAP1Q9UPQ3 857 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 SCINQ9Y6U3 715 aa20.23■□□□□ 0.83
HDAC10-204ENST00000429374 TRIP11Q15643 1979 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 CCDC66A2RUB6 948 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 CCDC188H7C350 402 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 XPOTO43592 962 aaKnown RBP20.22■□□□□ 0.83
HDAC10-204ENST00000429374 WEE2P0C1S8 567 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 CTNNA2P26232 953 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 POLR2BP30876 1174 aaKnown RBP20.22■□□□□ 0.83
HDAC10-204ENST00000429374 SLC1A1P43005 524 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 C2orf54Q08AI8 447 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 MYO1EQ12965 1108 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 MAP3K21Q5TCX8 1036 aa20.22■□□□□ 0.83
HDAC10-204ENST00000429374 CCSAPQ6IQ19 270 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms