RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ECI2O75521 394 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 NFICP08651 508 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 PDCP20941 246 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 SCP2P22307 547 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 CCR2P41597 374 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 AARSP49588 968 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 PFKPQ01813 784 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 CEBPZQ03701 1054 aaKnown RBP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 UBXN2BQ14CS0 331 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 PTPAQ15257 358 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 TANGO2Q6ICL3 276 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 FAM173BQ6P4H8 233 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 DYMQ7RTS9 669 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 SFR1Q86XK3 245 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 KRI1Q8N9T8 703 aaKnown RBP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 DLGAP2Q9P1A6 1054 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 CEP72Q9P209 647 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 CPSF3Q9UKF6 684 aaKnown RBP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 YIPF1Q9Y548 306 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 FAM186AA6NE01 2351 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 ZNF638Q14966 1978 aaKnown RBP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 DENND4CQ5VZ89 1909 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 OBSL1O75147 1896 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 KANSL1LA0AUZ9 987 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 MYL4P12829 197 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 GLULP15104 373 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 CD72P21854 359 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 ACOT2P49753 483 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 GTF2BQ00403 316 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 RESTQ13127 1097 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 GRM2Q14416 872 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 TMEM132DQ14C87 1099 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 SLC44A4Q53GD3 710 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 CYP4A22Q5TCH4 519 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 SPATA1Q5VX52 437 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 IQCEQ6IPM2 695 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 TPRG1Q6ZUI0 275 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 ZNF512Q96ME7 567 aaPredicted RBP18.54■□□□□ 0.56
TRIM39-209ENST00000428728 CLIC6Q96NY7 704 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 IKZF4Q9H2S9 585 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 ASAH2Q9NR71 780 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 FBXO2Q9UK22 296 aaPredicted RBP18.54■□□□□ 0.56
TRIM39-209ENST00000428728 R4GN57 208 aa18.54■□□□□ 0.56
TRIM39-209ENST00000428728 ZNF197O14709 1029 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 OAZ2O95190 189 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 VNN2O95498 520 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 GJA1P17302 382 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 FCARP24071 287 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 PRKCQQ04759 706 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 FAM78AQ5JUQ0 283 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 ADALQ6DHV7 355 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 OVOS1Q6IE37 1185 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 ELSPBP1Q96BH3 223 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 STK17AQ9UEE5 414 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 CCDC39Q9UFE4 941 aa18.53■□□□□ 0.56
TRIM39-209ENST00000428728 VPS13AQ96RL7 3174 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 ADRB2P07550 413 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 ODC1P11926 461 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 SYT1P21579 422 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 ABCD1P33897 745 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 DDIT3P35638 169 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 TXLNAP40222 546 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 C9orf57Q5W0N0 161 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 C1orf210Q8IVY1 113 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 CD302Q8IX05 232 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 SENP8Q96LD8 212 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 ASB16Q96NS5 453 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 TSPAN18Q96SJ8 248 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 TMEM209Q96SK2 561 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 DDX23Q9BUQ8 820 aaKnown RBP18.52■□□□□ 0.56
TRIM39-209ENST00000428728 CRISPLD1Q9H336 500 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 ZFP14Q9HCL3 533 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 LTB4R2Q9NPC1 389 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 HEBP1Q9NRV9 189 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 AGO2Q9UKV8 859 aaKnown RBP18.52■□□□□ 0.56
TRIM39-209ENST00000428728 MAFFQ9ULX9 164 aa18.52■□□□□ 0.56
TRIM39-209ENST00000428728 MTF2Q9Y483 593 aaPredicted RBP18.52■□□□□ 0.56
TRIM39-209ENST00000428728 OR6C75A6NL08 312 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 TULP1O00294 542 aaPredicted RBP18.51■□□□□ 0.55
TRIM39-209ENST00000428728 SPTLC1O15269 473 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 TYMPP19971 482 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 LILRA4P59901 499 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 DUSP4Q13115 394 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 TEAD2Q15562 447 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 RRAGBQ5VZM2 374 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 ADSSL1Q8N142 457 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 TTC9BQ8N6N2 239 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 KCNG4Q8TDN1 519 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 POMGNT1Q8WZA1 660 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 ZSWIM3Q96MP5 696 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 OXCT2Q9BYC2 517 aaPredicted RBP18.51■□□□□ 0.55
TRIM39-209ENST00000428728 BCO2Q9BYV7 579 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 SLITRK6Q9H5Y7 841 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 BRD9Q9H8M2 597 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 TBC1D7Q9P0N9 293 aa18.51■□□□□ 0.55
TRIM39-209ENST00000428728 SRPRBQ9Y5M8 271 aaKnown RBP18.51■□□□□ 0.55
TRIM39-209ENST00000428728 PTPRZ1P23471 2315 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms