RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 USH1GQ495M9 461 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 HERC4Q5GLZ8 1057 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 PDSS2Q86YH6 399 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 HOMEZQ8IX15 550 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 ZCCHC9Q8N567 271 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 LNX1Q8TBB1 728 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 SIRPGQ9P1W8 387 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 UVRAGQ9P2Y5 699 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 AJAP1Q9UKB5 411 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 ZNF148Q9UQR1 794 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 SNED1Q8TER0 1413 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 TM9SF1O15321 606 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 KRT36O76013 467 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CYP7A1P22680 504 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 RPL5P46777 297 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 HSF5Q4G112 596 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 SCN3AQ9NY46 2000 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 SMIM18P0DKX4 95 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CETPP11597 493 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 ACTN1P12814 892 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CPOXP36551 454 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 DCTN2Q13561 401 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 SLC1A5Q15758 541 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 EAPPQ56P03 285 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 KRT79Q5XKE5 535 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 GLYCTKQ8IVS8 523 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 LENG1Q96BZ8 264 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 HERPUD2Q9BSE4 406 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 YIPF2Q9BWQ6 316 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 TMOD4Q9NZQ9 345 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 COG5Q9UP83 839 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 H3BNX3 289 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 SLC16A3O15427 465 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 NEK3P51956 506 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 HPCAP84074 193 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CC2D2BQ6DHV5 1058 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 PPFIBP2Q8ND30 876 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 ETNPPLQ8TBG4 499 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 EPS8L1Q8TE68 723 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 FAM172AQ8WUF8 416 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 FIZ1Q96SL8 496 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 PPP1R12CQ9BZL4 782 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 KIAA1586Q9HCI6 787 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 METTL5Q9NRN9 209 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 PAIP2BQ9ULR5 123 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 EFR3BQ9Y2G0 817 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 SQORQ9Y6N5 450 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CYP2D7A0A087X1C5 515 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 MAGEB6P1A0A0J9YX57 407 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 WDR46O15213 610 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 SLC1A1P43005 524 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 FMO5P49326 533 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 LONRF1Q17RB8 773 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CCDC174Q6PII3 467 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 NEDD1Q8NHV4 660 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 SHC3Q92529 594 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 ARHGEF26Q96DR7 871 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 NSL1Q96IY1 281 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 OSBPL8Q9BZF1 889 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 TUBGCP4Q9UGJ1 667 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 GRID1Q9ULK0 1009 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 SHOC2Q9UQ13 582 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 COL5A2P05997 1499 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 VARSP26640 1264 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 SCNN1BP51168 640 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 RTP1P59025 263 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CTTNQ14247 550 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 LETM2Q2VYF4 491 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 CIAPIN1Q6FI81 312 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 FAM47EQ6ZV65 393 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 TREML1Q86YW5 311 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 OR6Y1Q8NGX8 325 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 NKD2Q969F2 451 aaPredicted RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 HNRNPABQ99729 332 aaKnown RBP5.44□□□□□ -1.54
RIF1-203ENST00000428287 PLK2Q9NYY3 685 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 APEX2Q9UBZ4 518 aa5.44□□□□□ -1.54
RIF1-203ENST00000428287 ALOX15BO15296 676 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 SORBS3O60504 671 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CCNT1O60563 726 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 CCNFP41002 786 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 RANBP1P43487 201 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CCNG2Q16589 344 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 DBN1Q16643 649 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 TAF1BQ53T94 588 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 KBTBD6Q86V97 674 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CROCCP3Q8IVE0 287 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 ZNF653Q96CK0 615 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 IGSF9Q9P2J2 1179 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 ZNF106Q9H2Y7 1883 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 RBM47A0AV96 593 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 ANKRD63C9JTQ0 380 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 EXOC3O60645 756 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PLCG2P16885 1265 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 BCAMP50895 628 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 GPC5P78333 572 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 DRAP1Q14919 205 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 Q6ZNX1 250 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PLEKHO2Q8TD55 490 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 ADAMTS16Q8TE57 1224 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 SH3RF3Q8TEJ3 882 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms