RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 JAK2O60674 1132 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 TRPA1O75762 1119 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 KRT33AO76009 404 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 KRT16P08779 473 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 GYS1P13807 737 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 PBLDP30039 288 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 RFC5P40937 340 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 MAPRE2Q15555 327 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 ZRANB3Q5FWF4 1079 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 CYFIP1Q7L576 1253 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 ENOSF1Q7L5Y1 443 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 SRBD1Q8N5C6 995 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 SLC20A1Q8WUM9 679 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 EPC1Q9H2F5 836 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 ETAA1Q9NY74 926 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 ERAP1Q9NZ08 941 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 BFARQ9NZS9 450 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 DSEQ9UL01 958 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 C3orf70A6NLC5 250 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 ARHGEF9O43307 516 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 NBNO60934 754 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 ENO2P09104 434 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 SLC2A3P11169 496 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 PNPLA4P41247 253 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 CLK3P49761 638 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 RNF25Q96BH1 459 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 ACSF2Q96CM8 615 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 EDC3Q96F86 508 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 FOXP3Q9BZS1 431 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 CBX8Q9HC52 389 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 INTS9Q9NV88 658 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 COMMD8Q9NX08 183 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 MPP6Q9NZW5 540 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 ZNF711Q9Y462 761 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 MYOM2P54296 1465 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 FAM107AO95990 144 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 MYBP10242 640 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 KRT4P19013 534 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 CCT5P48643 541 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 VAMP7P51809 220 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 OXCT1P55809 520 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 CCDC85BQ15834 202 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 ALG11Q2TAA5 492 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 KLHL38Q2WGJ6 581 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 TTLL9Q3SXZ7 439 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 FNDC3BQ53EP0 1204 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 STRIP1Q5VSL9 837 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 TIGD7Q6NT04 549 aaPredicted RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 SEPT1Q8WYJ6 367 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 EIF2AK1Q9BQI3 630 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 ABCG4Q9H172 646 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 BHMT2Q9H2M3 363 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 THAP9Q9H5L6 903 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 PPIEQ9UNP9 301 aaKnown RBP6.01□□□□□ -1.45
HERC4-206ENST00000427635 AGAP1Q9UPQ3 857 aa6.01□□□□□ -1.45
HERC4-206ENST00000427635 TBKBP1A7MCY6 615 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PGRMC1O00264 195 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 ZC3H11AO75152 810 aaKnown RBP eCLIP6□□□□□ -1.45
HERC4-206ENST00000427635 RFX3P48380 749 aa6□□□□□ -1.45
HERC4-206ENST00000427635 NDUFV1P49821 464 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PPIL2Q13356 520 aa6□□□□□ -1.45
HERC4-206ENST00000427635 BTG3Q14201 252 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 DMC1Q14565 340 aa6□□□□□ -1.45
HERC4-206ENST00000427635 SPATS2Q86XZ4 545 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 SCYL3Q8IZE3 742 aa6□□□□□ -1.45
HERC4-206ENST00000427635 CCNYL1Q8N7R7 359 aa6□□□□□ -1.45
HERC4-206ENST00000427635 NKX2-3Q8TAU0 364 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PUS3Q9BZE2 481 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 MTFR1LQ9H019 292 aa6□□□□□ -1.45
HERC4-206ENST00000427635 TRPM5Q9NZQ8 1165 aa6□□□□□ -1.45
HERC4-206ENST00000427635 KANSL3Q9P2N6 904 aa6□□□□□ -1.45
HERC4-206ENST00000427635 BAIAP2L1Q9UHR4 511 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ANAPC7Q9UJX3 599 aa6□□□□□ -1.45
HERC4-206ENST00000427635 KDM5AP29375 1690 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 ABCA5Q8WWZ7 1642 aa6□□□□□ -1.45
HERC4-206ENST00000427635 EEF2KO00418 725 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 PJA2O43164 708 aa6□□□□□ -1.45
HERC4-206ENST00000427635 HBP1O60381 514 aa6□□□□□ -1.45
HERC4-206ENST00000427635 FKTNO75072 461 aa6□□□□□ -1.45
HERC4-206ENST00000427635 LUC7L3O95232 432 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 NFICP08651 508 aa6□□□□□ -1.45
HERC4-206ENST00000427635 CMA1P23946 247 aa6□□□□□ -1.45
HERC4-206ENST00000427635 LRRC63Q05C16 580 aa6□□□□□ -1.45
HERC4-206ENST00000427635 NCAPHQ15003 741 aa6□□□□□ -1.45
HERC4-206ENST00000427635 VPS72Q15906 364 aa6□□□□□ -1.45
HERC4-206ENST00000427635 AGAP9Q5VTM2 703 aa6□□□□□ -1.45
HERC4-206ENST00000427635 KDELC2Q7Z4H8 507 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ANKRD13CQ8N6S4 541 aa6□□□□□ -1.45
HERC4-206ENST00000427635 SOCS4Q8WXH5 440 aa6□□□□□ -1.45
HERC4-206ENST00000427635 SPASTQ9UBP0 616 aa6□□□□□ -1.45
HERC4-206ENST00000427635 APOBEC2Q9Y235 224 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 PRG3Q9Y2Y8 225 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 BTBD18B2RXH4 712 aa6□□□□□ -1.45
HERC4-206ENST00000427635 UBE2Q2LH0YL09 131 aa6□□□□□ -1.45
HERC4-206ENST00000427635 NPTXRO95502 500 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DPEP1P16444 411 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PTPN3P26045 913 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ADD1P35611 737 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 TRIM65Q6PJ69 517 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PID1Q7Z2X4 250 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms