RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CRYBB1P53674 252 aaPredicted RBP28.41■■■□□ 2.14
SH3GL3-202ENST00000427482 NAA35Q5VZE5 725 aa28.41■■■□□ 2.14
SH3GL3-202ENST00000427482 MCOLN2Q8IZK6 566 aa28.41■■■□□ 2.14
SH3GL3-202ENST00000427482 CYFIP2Q96F07 1278 aa28.41■■■□□ 2.14
SH3GL3-202ENST00000427482 PLEKHA5Q9HAU0 1116 aa28.41■■■□□ 2.14
SH3GL3-202ENST00000427482 NXF1Q9UBU9 619 aaKnown RBP28.41■■■□□ 2.14
SH3GL3-202ENST00000427482 CFHP08603 1231 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 WEE2P0C1S8 567 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 NOMO3P69849 1222 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 TAF2Q6P1X5 1199 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 CXCL17Q6UXB2 119 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 ZNF564Q8TBZ8 553 aaPredicted RBP28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 CPA5Q8WXQ8 436 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 TRIM11Q96F44 468 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 CNOT8Q9UFF9 292 aaKnown RBP28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 CHORDC1Q9UHD1 332 aaPredicted RBP28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 ITGA11Q9UKX5 1188 aa28.4■■■□□ 2.14
SH3GL3-202ENST00000427482 MYBL1P10243 752 aa28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 NSFP46459 744 aaKnown RBP28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 ZNF606Q8WXB4 792 aa28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 AVENQ9NQS1 362 aaPredicted RBP28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 SNTG2Q9NY99 539 aa28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 GTF2IRD1Q9UHL9 959 aa28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 DERAQ9Y315 318 aa28.39■■■□□ 2.14
SH3GL3-202ENST00000427482 ADAMTS4O75173 837 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 NBPF20Q3BBV1 942 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 WDR72Q3MJ13 1102 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 KIF12Q96FN5 646 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 SNX27Q96L92 541 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 SELENOOQ9BVL4 669 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 RNF186Q9NXI6 227 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 DPP3Q9NY33 737 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 ALG6Q9Y672 507 aa28.39■■■□□ 2.13
SH3GL3-202ENST00000427482 DDX3YO15523 660 aaKnown RBP28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 TUBBP07437 444 aa28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 POLR2BP30876 1174 aaKnown RBP28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 BRD3Q15059 726 aa28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 PPP1R2P3Q6NXS1 205 aa28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 MON1BQ7L1V2 547 aa28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 CFHR5Q9BXR6 569 aa28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 RNF216Q9NWF9 866 aaPredicted RBP28.38■■■□□ 2.13
SH3GL3-202ENST00000427482 TARSL2A2RTX5 802 aaKnown RBP28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 CCDC151A5D8V7 595 aa28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 GUCY2FP51841 1108 aa28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 PASD1Q8IV76 773 aa28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 ACTRT1Q8TDG2 376 aa28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 ZNF446Q9NWS9 450 aa28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 PIN4Q9Y237 131 aaKnown RBP28.37■■■□□ 2.13
SH3GL3-202ENST00000427482 STAU1O95793 577 aaKnown RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 CCND3P30281 292 aaPredicted RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 PHF13Q86YI8 300 aaPredicted RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 XPNPEP3Q9NQH7 507 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 CREBZFQ9NS37 354 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 RBM12Q9NTZ6 932 aaKnown RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 AGAP1Q9UPQ3 857 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 THSD7BQ9C0I4 1608 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 PRKAR2AP13861 404 aaKnown RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 ELNP15502 786 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 RAP1GAPP47736 663 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 YARSP54577 528 aaKnown RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 RBP5P82980 135 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 MESDQ14696 234 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 ZNF394Q53GI3 561 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 WDR93Q6P2C0 686 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 TMCO3Q6UWJ1 677 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 RASGEF1CQ8N431 466 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 USP38Q8NB14 1042 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 UBE2Q2Q8WVN8 375 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 HPDLQ96IR7 371 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 RPS6KC1Q96S38 1066 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 CELF4Q9BZC1 486 aaKnown RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 TRIM6Q9C030 488 aaPredicted RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 SDCBP2Q9H190 292 aa28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 NXF3Q9H4D5 531 aaKnown RBP28.36■■■□□ 2.13
SH3GL3-202ENST00000427482 CEP104O60308 925 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 BRD2P25440 801 aaKnown RBP28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 SSTR3P32745 418 aaPredicted RBP28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 VCPIP1Q96JH7 1222 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 ZSWIM1Q9BR11 485 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 CXCL16Q9H2A7 254 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 SMYD3Q9H7B4 428 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 CYP3A43Q9HB55 503 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 HES2Q9Y543 173 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 SCN1AP35498 2009 aa28.35■■■□□ 2.13
SH3GL3-202ENST00000427482 TMEM110-MUSTN1A8MSY1 372 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 MIF4GDA9UHW6 222 aaKnown RBP28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 P4HA1P13674 534 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 RRM1P23921 792 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 VSNL1P62760 191 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 MRPS6P82932 125 aaKnown RBP28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 GDF6Q6KF10 455 aaPredicted RBP28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 CCDC70Q6NSX1 233 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 CC2D1AQ6P1N0 951 aaPredicted RBP28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 LSM8O95777 96 aaKnown RBP28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 UBXN11Q5T124 520 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 ALKAL1Q6UXT8 129 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 KLHDC9Q8NEP7 349 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 ZMAT2Q96NC0 199 aaKnown RBP28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 CNTN3Q9P232 1028 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 SRRDQ9UH36 339 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms