RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 OAS2P29728 719 aaKnown RBP23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 RGS2P41220 211 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 IRF5Q13568 498 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 SLC10A6Q3KNW5 377 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 ADAT2Q7Z6V5 191 aaKnown RBP23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 TRIM7Q9C029 511 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 NRCAMQ92823 1304 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 SART1O43290 800 aaKnown RBP23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 ITGB3P05106 788 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 MFSD10Q14728 455 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 ADPGKQ9BRR6 497 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 ADAM22Q9P0K1 906 aa23.2■■□□□ 1.3
CNEP1R1-202ENST00000427478 A0A1B0GUA9 196 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 CTNNA1P35221 906 aaKnown RBP23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 RAP1GAPP47736 663 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 CARSP49589 748 aaKnown RBP23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 PEX5P50542 639 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 MMS22LQ6ZRQ5 1243 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 SND1Q7KZF4 910 aaKnown RBP eCLIP23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 IFT81Q8WYA0 676 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 ADAMTS10Q9H324 1103 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 NR2E1Q9Y466 385 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 PCNTO95613 3336 aa23.19■■□□□ 1.3
CNEP1R1-202ENST00000427478 H3BQF6 201 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 TNPO2O14787 897 aaKnown RBP23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 EPHB4P54760 987 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 ZNF667Q5HYK9 610 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 LIN9Q5TKA1 542 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 CASKIN2Q8WXE0 1202 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 NAP1L3Q99457 506 aaPredicted RBP23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 APBA2Q99767 749 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 ASB7Q9H672 318 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 ZFYVE28Q9HCC9 887 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 MYL3P08590 195 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 CYP2C9P11712 490 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 CTNNA2P26232 953 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 BEX3Q00994 111 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 CRHR2Q13324 411 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 KYAT1Q16773 422 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 WDR72Q3MJ13 1102 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 RUFY4Q6ZNE9 571 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 PHF13Q86YI8 300 aaPredicted RBP23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 ACAP3Q96P50 834 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 AMACRQ9UHK6 382 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 HPCAL4Q9UM19 191 aa23.18■■□□□ 1.3
CNEP1R1-202ENST00000427478 TRIP12Q14669 1992 aaPredicted RBP23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 CCDC66A2RUB6 948 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 GPS2Q13227 327 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 HIC1Q14526 733 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 TMEM132DQ14C87 1099 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 SEL1L2Q5TEA6 688 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 SOCS4Q8WXH5 440 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 OSMRQ99650 979 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 GCOM2Q9BZD3 368 aaPredicted RBP23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 VIPAS39Q9H9C1 493 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 CDHR5Q9HBB8 845 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 GJD2Q9UKL4 321 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 NFU1Q9UMS0 254 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 PCDHA3Q9Y5H8 950 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 TRIP11Q15643 1979 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 RALGAPA2Q2PPJ7 1873 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 GPR32O75388 356 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 PSEN2P49810 448 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 CPT1AP50416 773 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 GUCY2FP51841 1108 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 YWHAEP62258 255 aaKnown RBP23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 POU5F1Q01860 360 aaKnown RBP23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 TRADDQ15628 312 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 KCTD19Q17RG1 926 aaPredicted RBP23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 AP5M1Q9H0R1 490 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 ACBD3Q9H3P7 528 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 SLITRK6Q9H5Y7 841 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 ERVK-5Q9HDB9 667 aa23.17■■□□□ 1.3
CNEP1R1-202ENST00000427478 NPTXRO95502 500 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 PYGMP11217 842 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 INHBEP58166 350 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 PTP4A2Q12974 167 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 PAK2Q13177 524 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 CATSPER4Q7RTX7 472 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 C1orf131Q8NDD1 294 aaKnown RBP23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 CXorf38Q8TB03 319 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 VCPIP1Q96JH7 1222 aa23.16■■□□□ 1.3
CNEP1R1-202ENST00000427478 GOLGA6L10A0A0M3HER8 536 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 SMIM35A0A1B0GVV1 85 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 MBLAC1A4D2B0 266 aaPredicted RBP23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 FAM155AB1AL88 458 aaPredicted RBP23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 POLR3GO15318 223 aaPredicted RBP23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 POLR2BP30876 1174 aaKnown RBP23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 CDH8P55286 799 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 C1QBPQ07021 282 aaKnown RBP23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 CLUL1Q15846 466 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 PPP1R2P3Q6NXS1 205 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 EMBQ6PCB8 327 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 TFAP2BQ92481 460 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 BCO2Q9BYV7 579 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 SDCBP2Q9H190 292 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 MYO1FO00160 1098 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 CTGFP29279 349 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 UBE2Q2Q8WVN8 375 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 CELF4Q9BZC1 486 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms